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ints15 integrator complex subunit 15 [ Danio rerio (zebrafish) ]

Gene ID: 393295, updated on 9-Dec-2024

Summary

Official Symbol
ints15provided by ZNC
Official Full Name
integrator complex subunit 15provided by ZNC
Primary source
ZFIN:ZDB-GENE-040426-1019
See related
Ensembl:ENSDARG00000037652 AllianceGenome:ZFIN:ZDB-GENE-040426-1019
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:56409; zgc:77458
Summary
Predicted to be located in nucleus. Predicted to be part of integrator complex. Orthologous to human INTS15 (integrator complex subunit 15). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See ints15 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 1 NC_007112.7 (9873310..9885325, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 1 NC_007112.6 (9189123..9201240, complement)

Chromosome 1 - NC_007112.7Genomic Context describing neighboring genes Neighboring gene mitotic arrest deficient 1 like 1 Neighboring gene phosphomannomutase 2 Neighboring gene regulator of G protein signaling 11 Neighboring gene post-glycosylphosphatidylinositol attachment to proteins 6

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Clone Names

  • MGC56409

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
part_of integrator complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of integrator complex ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
integrator complex subunit 15
Names
uncharacterized protein C7orf26 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_200325.1NP_956619.1  integrator complex subunit 15

    See identical proteins and their annotated locations for NP_956619.1

    Status: PROVISIONAL

    Source sequence(s)
    BC052107
    UniProtKB/Swiss-Prot
    Q7ZTY6
    Related
    ENSDARP00000119765.1, ENSDART00000138630.3
    Conserved Domains (1) summary
    pfam14964
    Location:2375
    DUF4507; Domain of unknown function (DUF4507)

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007112.7 Reference GRCz11 Primary Assembly

    Range
    9873310..9885325 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005170851.5XP_005170908.1  integrator complex subunit 15 isoform X1

    See identical proteins and their annotated locations for XP_005170908.1

    UniProtKB/Swiss-Prot
    Q6NYU1, Q7ZTY6
    Related
    ENSDARP00000054842.6, ENSDART00000054843.7
    Conserved Domains (1) summary
    pfam14964
    Location:2375
    DUF4507; Domain of unknown function (DUF4507)