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ociad1 OCIA domain containing 1 [ Danio rerio (zebrafish) ]

Gene ID: 393272, updated on 4-Jan-2025

Summary

Official Symbol
ociad1provided by ZNC
Official Full Name
OCIA domain containing 1provided by ZNC
Primary source
ZFIN:ZDB-GENE-040426-1100
See related
Ensembl:ENSDARG00000052334 AllianceGenome:ZFIN:ZDB-GENE-040426-1100
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:56639; zgc:76992
Summary
Predicted to be active in endosome. Orthologous to human OCIAD1 (OCIA domain containing 1). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See ociad1 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 20 NC_007131.7 (23245620..23253570, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 20 NC_007131.6 (23346520..23354470, complement)

Chromosome 20 - NC_007131.7Genomic Context describing neighboring genes Neighboring gene U5 spliceosomal RNA Neighboring gene OCIA domain containing 2 Neighboring gene furry homolog, like Neighboring gene zygote arrest 1

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Clone Names

  • MGC56639

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in endosome IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
OCIA domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_200302.2NP_956596.1  OCIA domain-containing protein 1

    See identical proteins and their annotated locations for NP_956596.1

    Status: PROVISIONAL

    Source sequence(s)
    BC049514
    UniProtKB/Swiss-Prot
    Q6NYD7, Q7ZW99
    Related
    ENSDARP00000094142.3, ENSDART00000103365.5
    Conserved Domains (1) summary
    pfam07051
    Location:11113
    OCIA; Ovarian carcinoma immunoreactive antigen (OCIA)

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007131.7 Reference GRCz11 Primary Assembly

    Range
    23245620..23253570 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)