unk unk zinc finger [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: unkprovided by ZNC
Official Full Name: unk zinc fingerprovided by ZNC
Primary source: ZFIN:ZDB-GENE-040426-707
See related: Ensembl:ENSDARG00000000935 AllianceGenome:ZFIN:ZDB-GENE-040426-707
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zc3h5; zc3hdc5; zgc:55407
Summary: Predicted to enable mRNA CDS binding activity. Predicted to be involved in cell morphogenesis involved in neuron differentiation. Predicted to be located in cytoplasm. Orthologous to human UNK (unk zinc finger). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 12

Exon count:: 15

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	12	NC_007123.7 (36428052..36471946)
105	previous assembly	GRCz10 (GCF_000002035.5)	12	NC_007123.6 (35755311..35799205)

Chromosome 12 - NC_007123.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables mRNA CDS binding	IBA Inferred from Biological aspect of Ancestor more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in cell morphogenesis involved in neuron differentiation	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: RING finger protein unkempt homolog

Names: unkempt family zinc finger; unkempt homolog; zinc finger CCCH type domain containing 5; zinc finger CCCH-type containing 5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_200236.2 → NP_956530.2 RING finger protein unkempt homolog

Status: VALIDATED

Source sequence(s)

AL807798, CR752650, EH489030, EH515397

UniProtKB/TrEMBL

A0A8M1PE84, F1Q639, F1QL48

Related

ENSDARP00000115842.1, ENSDART00000131300.2

Conserved Domains (1) summary

cl15270
Location:577 → 671

FinO_conjug_rep; FinO bacterial conjugation repressor domain; the basic protein FinO is part of the the two component FinOP system which is responsible for repressing bacterial conjugation; the FinOP system represses the transfer (tra) operon of the F-plasmid which ...