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nad1 NADH dehydrogenase subunit 1;hypothetical protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 3890477, discontinued on 6-Apr-2018
  • This record was discontinued.

Summary

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Gene symbol
nad1
Gene description
NADH dehydrogenase subunit 1;hypothetical protein
Locus tag
ArthMp044
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Arabidopsis thaliana (ecotype: C24)
Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001284.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The production of mature nad1 requires the assembly of 3 independent RNA precursors via 2 trans-splicing reactions. The lack of nad1 in mtsf2 mutants results from the specific destabilization of the nad1 exons 2-3 precursor transcript. MTSF2 binds to its 3 extremity with high affinity. MTSF2 binding to nad1 exons 2-3 precursor stabilizes the transcript and defines a 3 extremity compatible with trans-splicing.
    Title: The pentatricopeptide repeat protein MTSF2 stabilizes a nad1 precursor transcript and defines the 3΄ end of its 5΄-half intron.
  2. RNA editing of nad7 and atp1 transcripts in Arabidopsis mitochondria requires the pentatricopeptide repeat protein OTP87
    Title: The pentatricopeptide repeat protein OTP87 is essential for RNA editing of nad7 and atp1 transcripts in Arabidopsis mitochondria.
  3. study identified a nuclear gene (OTP43) absolutely required for trans-splicing of intron 1 (and only intron 1) of Arabidopsis thaliana nad1 transcripts
    Title: The pentatricopeptide repeat gene OTP43 is required for trans-splicing of the mitochondrial nad1 Intron 1 in Arabidopsis thaliana.
Submit: New GeneRIF Correction

General gene information

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regulatory

  • Loc: c298204-298196 regulatory_class = promoter
  • Loc: c305594-305586 regulatory_class = promoter

General protein information

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Preferred Names
NADH dehydrogenase subunit 1;hypothetical protein
NP_085566.1
  • orf106f
NP_085567.1
  • orf152b
    identical to orf152a
NP_085568.1
  • orf106g
NP_085570.1
  • orf111b
NP_085572.1
  • orf294
NP_085573.1
  • orf101b
NP_085574.1
  • orf113
NP_085576.1
  • orf100c
NP_085578.1
  • orf205

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001284.2 Reference assembly

    Range
    287917..318390 complement, 143219..147048 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_085565.3 NADH dehydrogenase subunit 1 (mitochondrion) [Arabidopsis thaliana]

    Status: PROVISIONAL

  2. NP_085566.1 hypothetical protein ArthMp044 (mitochondrion) [Arabidopsis thaliana]

    Status: PROVISIONAL

  3. NP_085567.1 hypothetical protein ArthMp044 (mitochondrion) [Arabidopsis thaliana]

    Status: PROVISIONAL

  4. NP_085568.1 hypothetical protein ArthMp044 (mitochondrion) [Arabidopsis thaliana]

    Status: PROVISIONAL

  5. NP_085570.1 hypothetical protein ArthMp044 (mitochondrion) [Arabidopsis thaliana]

    Status: PROVISIONAL

  6. NP_085572.1 hypothetical protein ArthMp044 (mitochondrion) [Arabidopsis thaliana]

    Status: PROVISIONAL

  7. NP_085573.1 hypothetical protein ArthMp044 (mitochondrion) [Arabidopsis thaliana]

    Status: PROVISIONAL

  8. NP_085574.1 hypothetical protein ArthMp044 (mitochondrion) [Arabidopsis thaliana]

    Status: PROVISIONAL

  9. NP_085576.1 hypothetical protein ArthMp044 (mitochondrion) [Arabidopsis thaliana]

    Status: PROVISIONAL

  10. NP_085578.1 hypothetical protein ArthMp044 (mitochondrion) [Arabidopsis thaliana]

    Status: PROVISIONAL

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P92544.1
P92548.1
P92550.1
P92551.1
P92552.1
P92554.1
P92556.1
P93299.1
P93300.1

Gene LinkOut

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Molecular Biology Databases
Research Materials