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CG34002 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 3885644, updated on 9-Dec-2024

Summary

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Official Symbol
CG34002provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0054002
Locus tag
Dmel_CG34002
See related
AllianceGenome:FB:FBgn0054002
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BP1025; Dmel\CG34002; MIP08535
Summary
Involved in sexual reproduction. Located in extracellular space. Is expressed in adult head. Orthologous to human GLIPR1 (GLI pathogenesis related 1) and CRISP1 (cysteine rich secretory protein 1). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG34002 in Genome Data Viewer
Location:
75A4-75A4; 3-45 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (17858474..17860482)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (17851574..17853582)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Tryptophanyl-tRNA synthetase, mitochondrial Neighboring gene uncharacterized protein Neighboring gene pseudo Neighboring gene pseudo

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Functional genome annotation of Drosophila seminal fluid proteins using transcriptional genetic networks. Ayroles JF, et al. Genet Res (Camb), 2011 Dec. PMID 22189604, Free PMC Article
  2. Evidence for the fixation of gene duplications by positive selection in Drosophila. Cardoso-Moreira M, et al. Genome Res, 2016 Jun. PMID 27197209, Free PMC Article
  3. Seminal fluid gene expression and reproductive fitness in Drosophila melanogaster. Patlar B, et al. BMC Ecol Evol, 2022 Feb 23. PMID 35196983, Free PMC Article
  4. A computational and experimental approach to validating annotations and gene predictions in the Drosophila melanogaster genome. Yandell M, et al. Proc Natl Acad Sci U S A, 2005 Feb 1. PMID 15668397, Free PMC Article
  5. Proteomics reveals novel Drosophila seminal fluid proteins transferred at mating. Findlay GD, et al. PLoS Biol, 2008 Jul 29. PMID 18666829, Free PMC Article

See all (22) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

mobile_element

  • Loc: 17858895-17859394 mobile_element_type = transposon:INE-1{}4506

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in sexual reproduction HEP PubMed 
involved_in sexual reproduction IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space HDA PubMed 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in extracellular space ISM
Inferred from Sequence Model
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
Names
CG34002-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    17858474..17860482
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001038940.2 → NP_001034029.2  uncharacterized protein Dmel_CG34002 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001034029.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    C1C556, Q2PDZ4
    Conserved Domains (1) summary
    cd05380
    Location:69 → 219
    SCP_euk; SCP_euk: SCP-like extracellular protein domain, as found mainly in eukaryotes. This family includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q2PDZ4 Q2PDZ4

Gene LinkOut

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