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Lcp65Ag1 Lcp65Ag1 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 38703, updated on 9-Dec-2024

Summary

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Official Symbol
Lcp65Ag1provided by FlyBase
Official Full Name
Lcp65Ag1provided by FlyBase
Primary source
FLYBASE:FBgn0020638
Locus tag
Dmel_CG10530
See related
AllianceGenome:FB:FBgn0020638
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG10530; DCP8-alpha; Dmel\CG10530; Lcp-g1; Lcp8; LCP8; L[[3]]CP8
Summary
Predicted to be a structural constituent of chitin-based larval cuticle. Predicted to be involved in chitin-based cuticle development. Predicted to be active in chitin-based extracellular matrix. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See Lcp65Ag1 in Genome Data Viewer
Location:
65A6-65A6; 3-16 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (6134697..6135274, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (6127797..6128374, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR46005 Neighboring gene Cuticular protein 65Au Neighboring gene Lcp65Ag2 Neighboring gene Lcp65Af Neighboring gene Lcp65Ae

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The cuticle proteins of Drosophila melanogaster: genetic localization of a second cluster of third-instar genes. Chihara CJ, et al. Genetics, 1986 Oct. PMID 3095183, Free PMC Article
  2. The procuticle of Drosophila: heterogeneity of urea-soluble proteins. Fristrom JW, et al. Biochemistry, 1978 Sep 19. PMID 101231
  3. The cuticle proteins of Drosophila melanogaster: stage specificity. Chihara CJ, et al. Dev Biol, 1982 Feb. PMID 6173274
  4. Pupal and larval cuticle proteins of Drosophila melanogaster. Silvert DJ, et al. Biochemistry, 1984 Nov 20. PMID 6441593
  5. A cluster of cuticle protein genes of Drosophila melanogaster at 65A: sequence, structure and evolution. Charles JP, et al. Genetics, 1997 Nov. PMID 9383064, Free PMC Article

See all (33) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables structural constituent of chitin-based larval cuticle IBA
Inferred from Biological aspect of Ancestor
more info
  
enables structural constituent of chitin-based larval cuticle ISM
Inferred from Sequence Model
more info
 PubMed 
enables structural constituent of chitin-based larval cuticle NAS
Non-traceable Author Statement
more info
 PubMed 
Process Evidence Code Pubs
involved_in chitin-based cuticle development ISM
Inferred from Sequence Model
more info
 PubMed 
involved_in larval chitin-based cuticle development NAS
Non-traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
is_active_in chitin-based extracellular matrix IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in chitin-based extracellular matrix ISM
Inferred from Sequence Model
more info
 PubMed 
located_in extracellular region NAS
Non-traceable Author Statement
more info
 PubMed 

General protein information

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Preferred Names
Lcp65Ag1
Names
CG10530-PA
Lcp65Ag1-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    6134697..6135274 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_057925.3 → NP_477273.1  Lcp65Ag1 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_477273.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    C0HL64, C0HL65, P92201
    UniProtKB/TrEMBL
    F3YDJ8
    Related
    FBpp0076766
    Conserved Domains (1) summary
    pfam00379
    Location:37 → 92
    Chitin_bind_4; Insect cuticle protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
C0HL64.1 C0HL64
C0HL65.1

Gene LinkOut

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Molecular Biology Databases
Research Materials