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Gm5347 predicted gene 5347 [ Mus musculus (house mouse) ]

Gene ID: 384814, updated on 27-Nov-2024

Summary

Official Symbol
Gm5347provided by MGI
Official Full Name
predicted gene 5347provided by MGI
Primary source
MGI:MGI:3647274
See related
AllianceGenome:MGI:3647274
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EG384814
Expression
Restricted expression toward testis adult (RPKM 2.1) See more
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Genomic context

See Gm5347 in Genome Data Viewer
Location:
8 A4; 8 24.08 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (44126695..44152528, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (43673658..43699500, complement)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene a disintegrin and metallopeptidase domain 26B pseudogene Neighboring gene a disintegrin and metallopeptidase domain 34 like Neighboring gene a disintegrin and metallopeptidase domain 34 Neighboring gene predicted gene 45488 Neighboring gene STARR-seq mESC enhancer starr_21337 Neighboring gene WW domain binding protein 11 pseudogene Neighboring gene peptidyl prolyl isomerase H pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
a disintegrin and metallopeptidase domain 34-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001079931.2NP_001073400.1  a disintegrin and metallopeptidase domain 34-like

    See identical proteins and their annotated locations for NP_001073400.1

    Status: VALIDATED

    Source sequence(s)
    AC125369, AC131115
    UniProtKB/TrEMBL
    Q7M765, Q8K4K0
    Conserved Domains (4) summary
    smart00608
    Location:491627
    ACR; ADAM Cysteine-Rich Domain
    cd04269
    Location:206394
    ZnMc_adamalysin_II_like; Zinc-dependent metalloprotease; adamalysin_II_like subfamily. Adamalysin II is a snake venom zinc endopeptidase. This subfamily contains other snake venom metalloproteinases, as well as membrane-anchored metalloproteases belonging to the ADAM family. ...
    pfam00200
    Location:415487
    Disintegrin
    pfam01562
    Location:40158
    Pep_M12B_propep; Reprolysin family propeptide

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    44126695..44152528 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)