U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Vmn1r177 vomeronasal 1 receptor 177 [ Mus musculus (house mouse) ]

Gene ID: 384572, updated on 9-Dec-2024

Summary

Go to the top of the page Help
Official Symbol
Vmn1r177provided by MGI
Official Full Name
vomeronasal 1 receptor 177provided by MGI
Primary source
MGI:MGI:3033481
See related
Ensembl:ENSMUSG00000057513 AllianceGenome:MGI:3033481
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
V1rd12
Summary
Is expressed in amygdala and telencephalon mantle layer. [provided by Alliance of Genome Resources, Dec 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Vmn1r177 in Genome Data Viewer
Location:
7 A3; 7 10.26 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (23564945..23565874, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (23865520..23866449, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor 175 Neighboring gene vomeronasal 1 receptor 176 Neighboring gene STARR-seq mESC enhancer starr_18245 Neighboring gene zinc finger protein 787 pseudogene Neighboring gene STARR-seq mESC enhancer starr_18246 Neighboring gene STARR-seq mESC enhancer starr_18247 Neighboring gene vomeronasal 1 receptor 178

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. A novel family of candidate pheromone receptors in mammals. Pantages E, et al. Neuron, 2000 Dec. PMID 11163270
  2. Multiple new and isolated families within the mouse superfamily of V1r vomeronasal receptors. Rodriguez I, et al. Nat Neurosci, 2002 Feb. PMID 11802169
  3. Manual annotation and analysis of the defensin gene cluster in the C57BL/6J mouse reference genome. Amid C, et al. BMC Genomics, 2009 Dec 15. PMID 20003482, Free PMC Article
  4. Extreme variability among mammalian V1R gene families. Young JM, et al. Genome Res, 2010 Jan. PMID 19952141, Free PMC Article
  5. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

Go to the top of the page Help
Preferred Names
vomeronasal 1 receptor, D12
Names
vomernasal 1 receptor Vmn1r177
vomeronasal receptor V1RD12

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_206872.2 → NP_996755.2  vomeronasal 1 receptor, D12

    Status: VALIDATED

    Source sequence(s)
    AC116686
    Consensus CDS
    CCDS20934.1
    UniProtKB/TrEMBL
    E9PXM3, Q8R2B7
    Related
    ENSMUSP00000073621.4, ENSMUST00000073967.4
    Conserved Domains (1) summary
    pfam03402
    Location:42 → 290
    V1R; Vomeronasal organ pheromone receptor family, V1R

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    23564945..23565874 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools