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CG13933 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 38227, updated on 2-Nov-2024

Summary

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Official Symbol
CG13933provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0035270
Locus tag
Dmel_CG13933
See related
AllianceGenome:FB:FBgn0035270
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
dmASBa; Dmel\CG13933
Summary
Predicted to be involved in intracellular signal transduction. Is expressed in organism and pole plasm. [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
all
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Genomic context

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See CG13933 in Genome Data Viewer
Location:
62B3-62B4; 3-1.0 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (1771809..1775147, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (1771809..1775147, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Chitinase 2 Neighboring gene uncharacterized protein Neighboring gene Dynein heavy chain at 62B Neighboring gene antisense RNA:CR44351 Neighboring gene DNA polymerase delta subunit 2 Neighboring gene uncharacterized protein Neighboring gene mitochondrial ribosomal protein L46

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Wg/Wnt1 and Erasp link ER stress to proapoptotic signaling in an autosomal dominant retinitis pigmentosa model. Park JE, et al. Exp Mol Med, 2023 Jul. PMID 37464094, Free PMC Article
  2. Genetic Basis of Increased Lifespan and Postponed Senescence in Drosophila melanogaster. Parker GA, et al. G3 (Bethesda), 2020 Mar 5. PMID 31969430, Free PMC Article
  3. The SOCS box: a tale of destruction and degradation. Kile BT, et al. Trends Biochem Sci, 2002 May. PMID 12076535
  4. In vivo proximity biotin ligation identifies the interactome of Egalitarian, a Dynein cargo adaptor. Baker FC, et al. Development, 2021 Nov 15. PMID 35020877, Free PMC Article
  5. Identification of genes that promote or inhibit olfactory memory formation in Drosophila. Walkinshaw E, et al. Genetics, 2015 Apr. PMID 25644700, Free PMC Article

See all (23) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG13933-PA
CG13933-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    1771809..1775147 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001274356.1 → NP_001261285.1  uncharacterized protein Dmel_CG13933, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001261285.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M9PDX4
    Conserved Domains (4) summary
    cd00204
    Location:65 → 218
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam07525
    Location:629 → 666
    SOCS_box; SOCS box
    pfam12796
    Location:169 → 254
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:234 → 260
    ANK; ANK repeat [structural motif]

  2. NM_139401.2 → NP_647658.1  uncharacterized protein Dmel_CG13933, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_647658.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9W089
    Related
    FBpp0072675
    Conserved Domains (4) summary
    cd00204
    Location:65 → 218
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam07525
    Location:630 → 667
    SOCS_box; SOCS box
    pfam12796
    Location:169 → 254
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:234 → 260
    ANK; ANK repeat [structural motif]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
M9PDX4 M9PDX4
Q9W089 Q9W089

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