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CG13921 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 38222, updated on 2-Nov-2024

Summary

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Official Symbol
CG13921provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0035267
Locus tag
Dmel_CG13921
See related
AllianceGenome:FB:FBgn0035267
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG13921
Summary
Is expressed in organism. [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
all
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Genomic context

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See CG13921 in Genome Data Viewer
Location:
62B1-62B1; 3-1.0 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (1746907..1752390)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (1746907..1752390)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Phosphatidylinositol glycan anchor biosynthesis class W b Neighboring gene Glycerol kinase 2 Neighboring gene Chitinase 2 Neighboring gene uncharacterized protein Neighboring gene Dynein heavy chain at 62B Neighboring gene antisense RNA:CR44351 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Context-dependent genetic architecture of Drosophila life span. Huang W, et al. PLoS Biol, 2020 Mar. PMID 32134916, Free PMC Article
  2. Evolutionary Dynamics of Abundant Stop Codon Readthrough. Jungreis I, et al. Mol Biol Evol, 2016 Dec. PMID 27604222, Free PMC Article
  3. Drosophila muller f elements maintain a distinct set of genomic properties over 40 million years of evolution. Leung W, et al. G3 (Bethesda), 2015 Mar 4. PMID 25740935, Free PMC Article
  4. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article
  5. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article

See all (22) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG13921-PB
CG13921-PC
CG13921-PD
CG13921-PE
CG13921-PF
CG13921-PG

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    1746907..1752390
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001274352.1 → NP_001261281.1  uncharacterized protein Dmel_CG13921, isoform F [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001261281.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F2FBA3, M9PGV2
    Conserved Domains (1) summary
    pfam04103
    Location:54 → 220
    CD20; CD20-like family

  2. NM_206235.3 → NP_995957.1  uncharacterized protein Dmel_CG13921, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_995957.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7KVA8, Q8IGL3
    Conserved Domains (1) summary
    pfam04103
    Location:301 → 468
    CD20; CD20-like family

  3. NM_001369971.1 → NP_001356973.1  uncharacterized protein Dmel_CG13921, isoform G [Drosophila melanogaster]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A4D6K3Y7, Q8IGL3
    Conserved Domains (2) summary
    pfam04103
    Location:301 → 467
    CD20; CD20-like family
    pfam15822
    Location:558 → 669
    MISS; MAPK-interacting and spindle-stabilizing protein-like

  4. NM_139399.3 → NP_647656.2  uncharacterized protein Dmel_CG13921, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_647656.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8IGL3, Q9W093
    Conserved Domains (1) summary
    pfam04103
    Location:301 → 467
    CD20; CD20-like family

  5. NM_001202090.2 → NP_001189019.1  uncharacterized protein Dmel_CG13921, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001189019.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F2FBA3, M9MRP1
    Conserved Domains (1) summary
    pfam04103
    Location:54 → 221
    CD20; CD20-like family

  6. NM_001274351.1 → NP_001261280.1  uncharacterized protein Dmel_CG13921, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001261280.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F2FBA3, M9PGV2
    Conserved Domains (1) summary
    pfam04103
    Location:54 → 220
    CD20; CD20-like family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A0A4D6K3Y7 A0A4D6K3Y7
M9MRP1 M9MRP1
M9PGV2 M9PGV2
Q7KVA8 Q7KVA8
Q8IGL3 Q8IGL3
Q9W093 Q9W093

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