U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

snoRNA:MeU6-A47 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 3772532, updated on 4-Jan-2025

Summary

Go to the top of the page Help
Official Symbol
snoRNA:MeU6-A47provided by FlyBase
Primary source
FLYBASE:FBgn0025882
Locus tag
Dmel_CR32519
See related
AllianceGenome:FB:FBgn0025882
Gene type
ncRNA
RNA name
snoRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
chrX:21197545..21197641; CR32519; Dmel\CR32519; MeU6-A47(Z30); mgU6-47; mgU6-47 snoRNA; snoRNA:Z30
Summary
Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Jan 2025]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See snoRNA:MeU6-A47 in Genome Data Viewer
Location:
20A1-20A1; 1-66 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (21386845..21386935, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (21257872..21257962, complement)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene waclaw Neighboring gene bobby sox Neighboring gene antisense RNA:CR45612 Neighboring gene antisense RNA:CR45611 Neighboring gene sluggish A Neighboring gene DEAD-box helicase 56 Neighboring gene misato Neighboring gene la costa

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The Schizosaccharomyces pombe mgU6-47 gene is required for 2'-O-methylation of U6 snRNA at A41. Zhou H, et al. Nucleic Acids Res, 2002 Feb 15. PMID 11842100, Free PMC Article
  2. Novel small Cajal-body-specific RNAs identified in Drosophila: probing guide RNA function. Deryusheva S, et al. RNA, 2013 Dec. PMID 24149844, Free PMC Article
  3. Developmentally regulated expression and expression strategies of Drosophila snoRNAs. Angrisani A, et al. Insect Biochem Mol Biol, 2015 Jun. PMID 25641266
  4. Structure-based whole-genome realignment reveals many novel noncoding RNAs. Will S, et al. Genome Res, 2013 Jun. PMID 23296921, Free PMC Article
  5. Comprehensive map of ribosomal 2'-O-methylation and C/D box snoRNAs in Drosophila melanogaster. Sklias A, et al. Nucleic Acids Res, 2024 Apr 12. PMID 38416577, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help
  • alternate names: snoRNA:Z30; Z30 small nucleolar RNA
  • snoRNA:MeU6-A47-RA; Dmel\snoRNA:MeU6-A47-RA; CR32519-RA; Dmel\CR32519-RA

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
  

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    21386845..21386935 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_002137.1 RNA Sequence

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials