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tRNA:His-GTG-1-4 transfer RNA:Histidine-GTG 1-4 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 3772362, updated on 9-Dec-2024

Summary

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Official Symbol
tRNA:His-GTG-1-4provided by FlyBase
Official Full Name
transfer RNA:Histidine-GTG 1-4provided by FlyBase
Primary source
FLYBASE:FBgn0011878
Locus tag
Dmel_CR30252
See related
AllianceGenome:FB:FBgn0011878
Gene type
tRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
AE002787.trna35-HisGTG; CAC; chr2R.trna17-HisGTG; CR30252; Dmel\CR30252; His-tRNA; His-tRNA-gtg-gamma; tRNA-His-GTG-1-4; tRNA:H:48F; tRNA:H:GTG:AE002787-e; tRNA:His; tRNA:his:48F; tRNA[His-48]; tRNA[His]
Summary
Predicted to enable CAC codon-amino acid adaptor activity. Predicted to be involved in translation. Predicted to be located in cytosol. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See tRNA:His-GTG-1-4 in Genome Data Viewer
Location:
48F10-48F10; 2-66 cM
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (12336418..12336489)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (8223923..8223994)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene transfer RNA:Histidine-GTG 1-3 Neighboring gene uncharacterized protein Neighboring gene transfer RNA:Histidine-GTG 2-1 pseudogene Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Post-transcriptional nucleotide addition is responsible for the formation of the 5' terminus of histidine tRNA. Cooley L, et al. Proc Natl Acad Sci U S A, 1982 Nov. PMID 6292903, Free PMC Article
  2. Matrices of paired substitutions show the effects of tRNA D/T loop sequence on Drosophila RNase P and 3'-tRNase processing. Levinger L, et al. J Biol Chem, 1998 Jan 9. PMID 9422763
  3. Sequence and structure requirements for Drosophila tRNA 5'- and 3'-end processing. Levinger L, et al. J Biol Chem, 1995 Aug 11. PMID 7642547
  4. Enzymatic addition of guanylate to histidine transfer RNA. Williams JB, et al. Methods Enzymol, 1990. PMID 2166216
  5. Processing of precursor tRNAs in Drosophila. Processing of the 3' end involves an endonucleolytic cleavage and occurs after 5' end maturation. Frendewey D, et al. J Biol Chem, 1985 Jan 10. PMID 3843841

See all (20) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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  • alternate names: transfer RNA:his:48F
  • tRNA:His-GTG-1-4-RA; Dmel\tRNA:His-GTG-1-4-RA; CR30252-RA; Dmel\CR30252-RA

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables CAC codon-amino acid adaptor activity ISM
Inferred from Sequence Model
more info
 PubMed 
enables triplet codon-amino acid adaptor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in translation IC
Inferred by Curator
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IC
Inferred by Curator
more info
 PubMed 
Nucleotide Protein
Heading Accession and Version

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