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tRNA:Val-AAC-2-1 transfer RNA:Valine-AAC 2-1 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 3772281, updated on 9-Dec-2024

Summary

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Official Symbol
tRNA:Val-AAC-2-1provided by FlyBase
Official Full Name
transfer RNA:Valine-AAC 2-1provided by FlyBase
Primary source
FLYBASE:FBgn0050225
Locus tag
Dmel_CR30225
See related
AllianceGenome:FB:FBgn0050225
Gene type
tRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
AE002787.trna51-ValAAC; chr2R.trna34-ValAAC; CR30225; Dmel\CR30225; GUU; tRNA-Val-AAC-2-1; tRNA:CR30225; tRNA:V4:56D; tRNA:V:AAC:AE002787-a; tRNA:val4:56D; tRNA[Val-AAC]; tRNA[Val][[4]]; valine tRNA
Summary
Predicted to enable GUU codon-amino acid adaptor activity. Predicted to be involved in translation. Predicted to be located in cytosol. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See tRNA:Val-AAC-2-1 in Genome Data Viewer
Location:
56D3-56D3; 2-89 cM
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (19414845..19414917)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (15302350..15302422)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene hu li tai shao Neighboring gene transfer RNA:Serine-CGA 1-4 Neighboring gene transfer RNA:Valine-AAC 2-2 Neighboring gene ncRNA Neighboring gene Calpain-A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. In vitro hyperprocessing of Drosophila tRNAs by the catalytic RNA of RNase P the cloverleaf structure of tRNA is not always stable? Hori Y, et al. Eur J Biochem, 2000 Aug. PMID 10903512
  2. RNA methylation by Dnmt2 protects transfer RNAs against stress-induced cleavage. Schaefer M, et al. Genes Dev, 2010 Aug 1. PMID 20679393, Free PMC Article
  3. Localization of tRNA genes of Drosophila melanogaster by in situ hybridization. Hayashi S, et al. Chromosoma, 1982. PMID 6814868
  4. Hybridization of tRNAs of Drosophila melanogaster to polytene chromosomes. Hayashi S, et al. Chromosoma, 1980. PMID 6766853
  5. Novel TRF1/BRF target genes revealed by genome-wide analysis of Drosophila Pol III transcription. Isogai Y, et al. EMBO J, 2007 Jan 10. PMID 17170711, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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  • alternate names: transfer RNA:CR30225; transfer RNA:val4:56D
  • tRNA:Val-AAC-2-1-RA; Dmel\tRNA:Val-AAC-2-1-RA; CR30225-RA; Dmel\CR30225-RA

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables GUU codon-amino acid adaptor activity ISM
Inferred from Sequence Model
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IC
Inferred by Curator
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IC
Inferred by Curator
more info
 PubMed 

Gene LinkOut

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