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His2B:CG33904 histone H2B [ Drosophila melanogaster (fruit fly) ]

Gene ID: 3772203, updated on 9-Dec-2024

Summary

Official Symbol
His2B:CG33904provided by FlyBase
Official Full Name
histone H2Bprovided by FlyBase
Primary source
FLYBASE:FBgn0053904
Locus tag
Dmel_CG33904
See related
AllianceGenome:FB:FBgn0053904
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG33904; Dmel\CG33904
Summary
Predicted to enable DNA binding activity. Predicted to be involved in chromatin organization. Predicted to be part of nucleosome. Orthologous to several human genes including H2BC1 (H2B clustered histone 1); H2BC11 (H2B clustered histone 11); and H2BC12L (H2B clustered histone 12 like). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

See His2B:CG33904 in Genome Data Viewer
Location:
39D3-39D3; 2-54 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (21438170..21438764, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (21438170..21438764, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene histone H3 Neighboring gene histone H1 Neighboring gene pseudo Neighboring gene histone H4

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables DNA binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables DNA binding NAS
Non-traceable Author Statement
more info
PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 
enables protein-containing complex binding IDA
Inferred from Direct Assay
more info
PubMed 
enables structural constituent of chromatin IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in chromatin organization ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 
part_of nucleosome NAS
Non-traceable Author Statement
more info
PubMed 
part_of nucleosome TAS
Traceable Author Statement
more info
PubMed 

General protein information

Preferred Names
histone H2B
Names
CG33904-PA
His2B:CG33904-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    21438170..21438764 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001032125.2NP_001027296.1  histone H2B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001027296.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P02283, Q4ABE1, Q9W5U7
    Conserved Domains (1) summary
    smart00427
    Location:33121
    H2B; Histone H2B