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CG13175 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 3771946, updated on 28-Oct-2024

Summary

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Official Symbol
CG13175provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0033693
Locus tag
Dmel_CG13175
See related
AllianceGenome:FB:FBgn0033693
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG33154; Dmel\CG13175
Orthologs
all
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Genomic context

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See CG13175 in Genome Data Viewer
Location:
48E6-48E7; 2-66 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (12182639..12185506)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (8070144..8073011)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR45264 Neighboring gene uncharacterized protein Neighboring gene washout Neighboring gene uncharacterized protein Neighboring gene Small ribonucleoprotein particle protein SmF Neighboring gene Cytochrome P450 6g1 Neighboring gene Cytochrome P450 6g2 Neighboring gene Cytochrome P450 6t3 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome ARTIST_v2-An Autonomous Bioinformatics Tool for Annotation of Natural Transposons in Sequenced Genomes. Ecovoiu AA, et al. Int J Mol Sci, 2022 Oct 21. PMID 36293549, Free PMC Article
  2. Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome. MacMillan HA, et al. Sci Rep, 2016 Jun 30. PMID 27357258, Free PMC Article
  3. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article
  4. Transient junction anisotropies orient annular cell polarization in the Drosophila airway tubes. Hosono C, et al. Nat Cell Biol, 2015 Dec. PMID 26551273
  5. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article

See all (22) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG13175-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    12182639..12185506
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_136896.2 → NP_610740.1  uncharacterized protein Dmel_CG13175 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_610740.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A1Z8U7
    Conserved Domains (1) summary
    pfam09811
    Location:26 → 64
    Yae1_N; Essential protein Yae1, N terminal
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A1Z8U7 A1Z8U7

Gene LinkOut

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