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tRNA:Phe-GAA-1-6 transfer RNA:Phenylalanine-GAA 1-6 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 3771933, updated on 9-Dec-2024

Summary

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Official Symbol
tRNA:Phe-GAA-1-6provided by FlyBase
Official Full Name
transfer RNA:Phenylalanine-GAA 1-6provided by FlyBase
Primary source
FLYBASE:FBgn0051588
Locus tag
Dmel_CR31588
See related
AllianceGenome:FB:FBgn0051588
Gene type
tRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
AE002708.trna5-PheGAA; chr3R.trna11-PheGAA; CR31588; Dmel\CR31588; tRNA-Phe-GAA-1-6; tRNA:CR31588; tRNA:F:GAA:AE002708-a; tRNA[Phe(GAA)]; UUC
Summary
Predicted to enable UUC codon-amino acid adaptor activity. Predicted to be involved in translation. Predicted to be located in cytosol. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See tRNA:Phe-GAA-1-6 in Genome Data Viewer
Location:
87F14-87F14; 3-54 cM
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (13797953..13798025)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (9623675..9623747)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45590 Neighboring gene Dipeptidase B Neighboring gene transfer RNA:Phenylalanine-GAA 1-7 Neighboring gene tarsal-less 2A Neighboring gene tarsal-less AA Neighboring gene tarsal-less 3A Neighboring gene tarsal-less 1A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. tRNA 2'-O-methylation by a duo of TRM7/FTSJ1 proteins modulates small RNA silencing in Drosophila. Angelova MT, et al. Nucleic Acids Res, 2020 Feb 28. PMID 31943105, Free PMC Article
  2. Dynamics of Dark-Fly Genome Under Environmental Selections. Izutsu M, et al. G3 (Bethesda), 2015 Dec 4. PMID 26637434, Free PMC Article
  3. Integrated tRNA, transcript, and protein profiles in response to steroid hormone signaling. Van Bortle K, et al. RNA, 2015 Oct. PMID 26289344, Free PMC Article
  4. GtRNAdb 2.0: an expanded database of transfer RNA genes identified in complete and draft genomes. Chan PP, et al. Nucleic Acids Res, 2016 Jan 4. PMID 26673694, Free PMC Article
  5. Systematic identification of tRNA genes in Drosophila melanogaster. Marygold SJ, et al. MicroPubl Biol, 2022. PMID 35789696, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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  • alternate names: transfer RNA:CR31588
  • tRNA:Phe-GAA-1-6-RA; Dmel\tRNA:Phe-GAA-1-6-RA; CR31588-RA; Dmel\CR31588-RA

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables UUC codon-amino acid adaptor activity ISM
Inferred from Sequence Model
more info
 PubMed 
enables triplet codon-amino acid adaptor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in translation IC
Inferred by Curator
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IC
Inferred by Curator
more info
 PubMed 

Gene LinkOut

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