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tRNA:SeC-TCA-1-1 transfer RNA:Selenocysteine-TCA 1-1 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 3771925, updated on 9-Dec-2024

Summary

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Official Symbol
tRNA:SeC-TCA-1-1provided by FlyBase
Official Full Name
transfer RNA:Selenocysteine-TCA 1-1provided by FlyBase
Primary source
FLYBASE:FBgn0011987
Locus tag
Dmel_CR30024
See related
AllianceGenome:FB:FBgn0011987
Gene type
tRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
AE002787.trna26-SeC(e)TCA; chr2R.trna85-SeC(e)TCA; chr2R:6873460..6873672; CR30024; CR30256; Dmel\CR30024; Sec tRNA; Sec tRNA[[Ser]Sec]; Sec-tRNA[[Ser]Sec]; SeCys-tRNA; tRNA-SeC-TCA-1-1; tRNA:SeC; tRNA:SeC:TCA:AE002787; tRNA:SeCys; tRNA[SeC]; tRNA[[Ser]Sec]
Summary
Predicted to enable UGA codon-amino acid adaptor activity. Predicted to be involved in translation. Predicted to be located in cytosol. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See tRNA:SeC-TCA-1-1 in Genome Data Viewer
Location:
47F5-47F5; 2-64 cM
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (11357564..11357650, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (7245069..7245155, complement)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene deltaTrypsin Neighboring gene uncharacterized protein Neighboring gene iotaTrypsin Neighboring gene uncharacterized protein Neighboring gene intersex

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Selenocysteine tRNAs as central components of selenoprotein biosynthesis in eukaryotes. Park SI, et al. Biomed Environ Sci, 1997 Sep. PMID 9315302
  2. Selenocysteine tRNA[Ser]Sec gene is ubiquitous within the animal kingdom. Lee BJ, et al. Mol Cell Biol, 1990 May. PMID 2139169, Free PMC Article
  3. Evolutionary dynamics of eukaryotic selenoproteomes: large selenoproteomes may associate with aquatic life and small with terrestrial life. Lobanov AV, et al. Genome Biol, 2007. PMID 17880704, Free PMC Article
  4. Selenoproteins: molecular pathways and physiological roles. Labunskyy VM, et al. Physiol Rev, 2014 Jul. PMID 24987004, Free PMC Article
  5. Selenoproteinless animals: selenophosphate synthetase SPS1 functions in a pathway unrelated to selenocysteine biosynthesis. Lobanov AV, et al. Protein Sci, 2008 Jan. PMID 18156471, Free PMC Article

See all (15) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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  • alternate names: transfer RNA:SeCys; Sec tRNA; selenocysteine tRNA
  • tRNA:SeC-TCA-1-1-RA; Dmel\tRNA:SeC-TCA-1-1-RA; CR30024-RA; Dmel\CR30024-RA

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables UGA codon-amino acid adaptor activity ISM
Inferred from Sequence Model
more info
 PubMed 
enables triplet codon-amino acid adaptor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in translation IC
Inferred by Curator
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IC
Inferred by Curator
more info
 PubMed 
Nucleotide Protein
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