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tRNA:Asp-GTC-1-3 transfer RNA:Aspartic acid-GTC 1-3 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 3771797, updated on 9-Dec-2024

Summary

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Official Symbol
tRNA:Asp-GTC-1-3provided by FlyBase
Official Full Name
transfer RNA:Aspartic acid-GTC 1-3provided by FlyBase
Primary source
FLYBASE:FBgn0051892
Locus tag
Dmel_CR31892
See related
AllianceGenome:FB:FBgn0051892
Gene type
tRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
AE002690.trna22-AspGTC; chr2L.trna32-AspGTC; CR31892; Dmel\CR31892; GAC; tRNA-Asp-GTC-1-3; tRNA-Asp[GUC]; tRNA:asp2:29D; tRNA:CR31892; tRNA:D2:29D; tRNA:D:GTC:AE002690-f; tRNA[Asp-GTC]; tRNA[[Asp]]
Summary
Predicted to enable GAC codon-amino acid adaptor activity. Predicted to be involved in translation. Predicted to be located in cytosol. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See tRNA:Asp-GTC-1-3 in Genome Data Viewer
Location:
29D1-29D1; 2-33 cM
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (8482084..8482155, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (8482084..8482155, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene dachs Neighboring gene Chemosensory protein A 29a Neighboring gene transfer RNA:Aspartic acid-GTC 1-2 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR43604

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The localization of tRNAAsp2 genes from Drosophila melanogaster by "in situ" hybridization. Schmidt T, et al. Mol Gen Genet, 1978 Sep 8. PMID 101767
  2. Mutations in Cytosine-5 tRNA Methyltransferases Impact Mobile Element Expression and Genome Stability at Specific DNA Repeats. Genenncher B, et al. Cell Rep, 2018 Feb 13. PMID 29444437
  3. RNA methylation by Dnmt2 protects transfer RNAs against stress-induced cleavage. Schaefer M, et al. Genes Dev, 2010 Aug 1. PMID 20679393, Free PMC Article
  4. Hybridization of tRNAs of Drosophila melanogaster to polytene chromosomes. Hayashi S, et al. Chromosoma, 1980. PMID 6766853
  5. Integrated tRNA, transcript, and protein profiles in response to steroid hormone signaling. Van Bortle K, et al. RNA, 2015 Oct. PMID 26289344, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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  • alternate names: transfer RNA:CR31892; transfer RNA:asp2:29D
  • tRNA:Asp-GTC-1-3-RA; Dmel\tRNA:Asp-GTC-1-3-RA; CR31892-RA; Dmel\CR31892-RA

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables GAC codon-amino acid adaptor activity ISM
Inferred from Sequence Model
more info
 PubMed 
enables triplet codon-amino acid adaptor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in translation IC
Inferred by Curator
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IC
Inferred by Curator
more info
 PubMed 

Gene LinkOut

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