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[ Arabidopsis thaliana (thale cress) ]

Gene ID: 3770670, updated on 11-Sep-2024

Summary

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Primary source
TAIR:AT5G13225
Locus tag
AT5G13225
See related
Araport:AT5G13225
Gene type
ncRNA
RNA name
snoRNA
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
67618.SNORNA00001
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Genomic context

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Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (4222003..4222085, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Uncharacterized conserved protein UCP015417, vWA Neighboring gene ncRNA Neighboring gene jasmonate-zim-domain protein 10 Neighboring gene ncRNA Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene transcription regulator

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within rRNA modification TAS
Traceable Author Statement
more info
  
Component Evidence Code Pubs
part_of sno(s)RNA-containing ribonucleoprotein complex TAS
Traceable Author Statement
more info
  

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    4222003..4222085 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_143262.1 RNA Sequence

    Status: REVIEWED

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials