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MIR165b [ Arabidopsis thaliana (thale cress) ]

Gene ID: 3770111, updated on 11-Sep-2024

Summary

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Official Symbol
MIR165b
Primary source
TAIR:AT4G00885
Locus tag
AT4G00885
See related
Araport:AT4G00885
Gene type
ncRNA
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MICRORNA 165; microRNA165B; MIR165; MIR165B; p_MI0000200
Summary
Encodes a microRNA that targets several HD-ZIPIII family members including PHV, PHB, REV, ATHB-8, and ATHB-15. MicroRNAs are regulatory RNAs with a mature length of ~21-nucleotides that are processed from hairpin precursors by Dicer-like enzymes. MicroRNAs can negatively regulate gene expression by attenuating translation or by directing mRNA cleavage.Mature sequence: UCGGACCAGGCUUCAUCCCC
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Genomic context

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See MIR165b in Genome Data Viewer
Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_003075.7 (369831..370012, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Plant invertase/pectin methylesterase inhibitor superfamily protein Neighboring gene SAUR-like auxin-responsive protein family Neighboring gene uncharacterized protein Neighboring gene proline-rich family protein Neighboring gene uncharacterized protein Neighboring gene miscRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Computational identification of plant microRNAs and their targets, including a stress-induced miRNA. Jones-Rhoades MW, et al. Mol Cell, 2004 Jun 18. PMID 15200956

GeneRIFs: Gene References Into Functions

General gene information

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  • mature miRNA accession:MIMAT0000188

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within miRNA-mediated post-transcriptional gene silencing TAS
Traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    369831..370012 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_141716.1 RNA Sequence

    Status: REVIEWED

Gene LinkOut

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