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AP2/B3-like transcriptional factor family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 3768753, updated on 18-Sep-2024

Summary

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Official Full Name
AP2/B3-like transcriptional factor family protein
Primary source
TAIR:AT3G19184
Locus tag
AT3G19184
See related
Araport:AT3G19184
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
7
Sequence:
Chromosome: 3; NC_003074.8 (6637347..6639278)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene presequence protease 1 Neighboring gene plastid division protein Neighboring gene autophagy 2 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping. Wanamaker SA, et al. Nat Methods, 2017 Aug. PMID 28650476, Free PMC Article
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001035649.4
NM_001338384.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
AP2/B3-like transcriptional factor family protein
NP_001030726.2
  • AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G42700.1); Has 304 Blast hits to 291 proteins in 31 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    6637347..6639278
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001035649.4 → NP_001030726.2  AP2/B3-like transcriptional factor family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001030726.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q1G3M3, Q9LJL1
    UniProtKB/TrEMBL
    A0A178VHQ0, A0A654F8N4
    Conserved Domains (2) summary
    cd10017
    Location:129 → 219
    B3_DNA; Plant-specific B3-DNA binding domain
    PTZ00482
    Location:221 → 277
    PTZ00482; membrane-attack complex/perforin (MACPF) Superfamily; Provisional

  2. NM_001338384.1 → NP_001326455.1  AP2/B3-like transcriptional factor family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LPB7, A0A654F8N4
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q1G3M3.1

Gene LinkOut

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