U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LCR9 low-molecular-weight cysteine-rich 9 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 3768128, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
LCR9
Official Full Name
low-molecular-weight cysteine-rich 9
Primary source
TAIR:AT2G27145
Locus tag
AT2G27145
See related
Araport:AT2G27145
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
low-molecular-weight cysteine-rich 9
Summary
Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family.
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LCR9 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_003071.7 (11600169..11600764, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Neighboring gene HSP20-like chaperones superfamily protein Neighboring gene abscisic aldehyde oxidase 3 Neighboring gene uncharacterized protein Neighboring gene Structural maintenance of chromosomes (SMC) family protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
low-molecular-weight cysteine-rich 9
NP_001031429.1
  • low-molecular-weight cysteine-rich 9 (LCR9); LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: S locus-related glycoprotein 1 binding pollen coat (InterPro:IPR010851); BEST Arabidopsis thaliana protein match is: low-molecular-weight cysteine-rich 1 (TAIR:AT5G48543.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    11600169..11600764 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001036352.2 → NP_001031429.1  low-molecular-weight cysteine-rich 9 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031429.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P82724
    UniProtKB/TrEMBL
    A0A5S9X1T4, A0A654F1K5
    Conserved Domains (1) summary
    pfam07333
    Location:25 → 78
    SLR1-BP; S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P82724.2

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools