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hypothetical protein (Protein of unknown function, DUF601) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 3768032, updated on 18-Sep-2024

Summary

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Official Full Name
hypothetical protein (Protein of unknown function, DUF601)
Primary source
TAIR:AT2G15110
Locus tag
AT2G15110
See related
Araport:AT2G15110
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T15J14.15; T15J14_15
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Genomic context

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Location:
chromosome: 2
Exon count:
6
Sequence:
Chromosome: 2; NC_003071.7 (6554847..6557168, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene miscRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
hypothetical protein (Protein of unknown function, DUF601)
NP_179115.2
  • Protein of unknown function, DUF601; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF601 (InterPro:IPR006736); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF601 (TAIR:AT1G46696.1); Has 2365 Blast hits to 2015 proteins in 377 species: Archae - 30; Bacteria - 336; Metazoa - 940; Fungi - 220; Plants - 116; Viruses - 8; Other Eukaryotes - 715 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    6554847..6557168 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_127073.2 → NP_179115.2  hypothetical protein (Protein of unknown function, DUF601) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_179115.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654ESZ4, F4IHH0
    Conserved Domains (1) summary
    pfam04642
    Location:194 → 469
    DUF601; Protein of unknown function, DUF601
Nucleotide Protein
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