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defensin-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 3766718, updated on 18-Sep-2024

Summary

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Official Full Name
defensin-like protein
Primary source
TAIR:AT1G13605
Locus tag
AT1G13605
See related
Araport:AT1G13605
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Summary
Encodes a defensin-like (DEFL) family protein.
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Genomic context

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Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (4658538..4659115)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene phytosulfokine 1 precursor Neighboring gene miscRNA Neighboring gene basic leucine-zipper 58 Neighboring gene Defensin-like (DEFL) family protein Neighboring gene Defensin-like (DEFL) family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001035961.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
defensin-like protein
NP_001031038.1
  • LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    4658538..4659115
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001035961.3 → NP_001031038.1  defensin-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031038.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A0MJU3, Q2V4N6
    UniProtKB/TrEMBL
    A0A178WDI4, A0A5S9U8S2
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q2V4N6.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials