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SCRL3 SCR-like 3 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 3766683, updated on 18-Sep-2024

Summary

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Official Symbol
SCRL3
Official Full Name
SCR-like 3
Primary source
TAIR:AT1G08695
Locus tag
AT1G08695
See related
Araport:AT1G08695
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
SCR-like 3
Summary
Encodes a member of a family of small, secreted, cysteine rich proteins with sequence similarity to SCR (S locus cysteine-rich protein).
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Genomic context

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See SCRL3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (2768965..2769508, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene MALE GAMETOPHYTE DEFECTIVE 2 Neighboring gene ENTH/VHS family protein Neighboring gene ARF GAP-like zinc finger-containing protein ZIGA4 Neighboring gene Presenilin-1 Neighboring gene F-box family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
SCR-like 3
NP_001031003.1
  • SCR-like 3 (SCRL3); INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant self-incompatibility response (InterPro:IPR010682); BEST Arabidopsis thaliana protein match is: SCR-like 1 (TAIR:AT4G10457.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    2768965..2769508 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001035926.2 → NP_001031003.1  SCR-like 3 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031003.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P82622
    UniProtKB/TrEMBL
    A0A5S9TBG4, A0A654ED55
    Conserved Domains (1) summary
    pfam06876
    Location:16 → 86
    SCRL; Plant self-incompatibility response (SCRL) protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P82622.2

Gene LinkOut

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