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CG3788 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 37644, updated on 4-Jan-2025

Summary

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Official Symbol
CG3788provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0034800
Locus tag
Dmel_CG3788
See related
AllianceGenome:FB:FBgn0034800
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG3788
Summary
Predicted to enable uridine phosphorylase activity. Predicted to be involved in uridine catabolic process. Predicted to be located in cytoplasm. Predicted to be active in cytosol. Is expressed in adult head and spermatozoon. Orthologous to human UPP1 (uridine phosphorylase 1) and UPP2 (uridine phosphorylase 2). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See CG3788 in Genome Data Viewer
Location:
59B6-59B6; 2-101 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (22932035..22934077, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (18819558..18821600, complement)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Nucleoporin 214kD Neighboring gene Receptor expression enhancing protein A Neighboring gene CCHC-type zinc finger nucleic acid binding protein Neighboring gene uncharacterized protein Neighboring gene Gustatory receptor-like Holozoa

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes. Phanse S, et al. Data Brief, 2016 Mar. PMID 26870755, Free PMC Article
  2. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article
  3. Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes. López-Varea A, et al. G3 (Bethesda), 2021 Dec 8. PMID 34599810, Free PMC Article
  4. CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans. Wei P, et al. Genome Res, 2020 Jan. PMID 31722958, Free PMC Article
  5. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article

See all (23) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables uridine phosphorylase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables uridine phosphorylase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in nucleoside metabolic process IEA
Inferred from Electronic Annotation
more info
  
involved_in nucleotide catabolic process IEA
Inferred from Electronic Annotation
more info
  
involved_in uridine catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG3788-PA
CG3788-PB
NP_001188991.1
NP_611738.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    22932035..22934077 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001202062.2 → NP_001188991.1  uncharacterized protein Dmel_CG3788, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001188991.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8T8S2, Q9W1X2
    Conserved Domains (1) summary
    TIGR01719
    Location:57 → 345
    euk_UDPppase; uridine phosphorylase

  2. NM_137894.3 → NP_611738.1  uncharacterized protein Dmel_CG3788, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_611738.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8T8S2, Q9W1X2
    Related
    FBpp0071904
    Conserved Domains (1) summary
    TIGR01719
    Location:57 → 345
    euk_UDPppase; uridine phosphorylase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8T8S2 Q8T8S2

Gene LinkOut

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