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Obp58d Odorant-binding protein 58d [ Drosophila melanogaster (fruit fly) ]

Gene ID: 37609, updated on 9-Dec-2024

Summary

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Official Symbol
Obp58dprovided by FlyBase
Official Full Name
Odorant-binding protein 58dprovided by FlyBase
Primary source
FLYBASE:FBgn0034770
Locus tag
Dmel_CG13519
See related
AllianceGenome:FB:FBgn0034770
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG13519; DmelObp58d; Dmel\CG13519
Summary
Predicted to enable odorant binding activity. Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See Obp58d in Genome Data Viewer
Location:
59A3-59A3; 2-101 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (22706934..22707772)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (18594439..18595277)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Odorant-binding protein 58b Neighboring gene Odorant-binding protein 58c Neighboring gene antisense RNA:CR43735 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Uncovering the functional constraints underlying the genomic organization of the odorant-binding protein genes. Librado P, et al. Genome Biol Evol, 2013. PMID 24148943, Free PMC Article
  2. Genome-wide analysis of the odorant-binding protein gene family in Drosophila melanogaster. Hekmat-Scafe DS, et al. Genome Res, 2002 Sep. PMID 12213773, Free PMC Article
  3. Molecular and cellular organization of odorant binding protein genes in Drosophila. Park K, et al. Heliyon, 2024 May 15. PMID 38694054, Free PMC Article
  4. Comparative genomic analysis of the odorant-binding protein family in 12 Drosophila genomes: purifying selection and birth-and-death evolution. Vieira FG, et al. Genome Biol, 2007. PMID 18039354, Free PMC Article
  5. Molecular evolution of the major chemosensory gene families in insects. Sánchez-Gracia A, et al. Heredity (Edinb), 2009 Sep. PMID 19436326

See all (29) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables odorant binding ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
involved_in sensory perception of chemical stimulus ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
 PubMed 

General protein information

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Preferred Names
Odorant-binding protein 58d
Names
CG13519-PA
Obp58d-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    22706934..22707772
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_137867.2 → NP_611711.1  Odorant-binding protein 58d [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_611711.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    D4G7D7, Q9W207
    Related
    FBpp0071783
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9W207 Q9W207

Gene LinkOut

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