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Cpr56F Cuticular protein 56F [ Drosophila melanogaster (fruit fly) ]

Gene ID: 37299, updated on 4-Jan-2025

Summary

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Official Symbol
Cpr56Fprovided by FlyBase
Official Full Name
Cuticular protein 56Fprovided by FlyBase
Primary source
FLYBASE:FBgn0034499
Locus tag
Dmel_CG9036
See related
AllianceGenome:FB:FBgn0034499
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG9036; DmelCpr56F; Dmel\CG9036
Summary
Predicted to be a structural constituent of chitin-based larval cuticle. Predicted to be involved in chitin-based cuticle development. Predicted to be located in chitin-based extracellular matrix. Predicted to be active in extracellular matrix. Is expressed in several structures, including adult head; embryonic epipharynx; embryonic hypopharynx; embryonic/larval posterior spiracle; and gut section. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

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See Cpr56F in Genome Data Viewer
Location:
56F16-56F16; 2-90 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (20288371..20291945, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (16175876..16179450, complement)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Casein kinase II beta2 subunit Neighboring gene long non-coding RNA:CR44638 Neighboring gene long non-coding RNA:CR44639

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Tentative identification of a resilin gene in Drosophila melanogaster. Ardell DH, et al. Insect Biochem Mol Biol, 2001 Sep. PMID 11483432
  2. Resilin matrix distribution, variability and function in Drosophila. Lerch S, et al. BMC Biol, 2020 Dec 14. PMID 33317537, Free PMC Article
  3. The conserved microRNA miR-8 tunes atrophin levels to prevent neurodegeneration in Drosophila. Karres JS, et al. Cell, 2007 Oct 5. PMID 17923093
  4. Fine-mapping nicotine resistance loci in Drosophila using a multiparent advanced generation inter-cross population. Marriage TN, et al. Genetics, 2014 Sep. PMID 25236448, Free PMC Article
  5. Alternative splicing of NURF301 generates distinct NURF chromatin remodeling complexes with altered modified histone binding specificities. Kwon SY, et al. PLoS Genet, 2009 Jul. PMID 19629165, Free PMC Article

See all (36) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables structural constituent of chitin-based larval cuticle ISM
Inferred from Sequence Model
more info
 PubMed 
Process Evidence Code Pubs
involved_in chitin-based cuticle development ISM
Inferred from Sequence Model
more info
 PubMed 
Component Evidence Code Pubs
located_in chitin-based extracellular matrix ISM
Inferred from Sequence Model
more info
 PubMed 
is_active_in extracellular matrix IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
cuticular protein 56F
Names
CG9036-PA
Cpr56F-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    20288371..20291945 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_137626.3 → NP_611470.1  cuticular protein 56F [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_611470.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7JZJ3
    Related
    FBpp0085613
    Conserved Domains (1) summary
    pfam00379
    Location:128 → 179
    Chitin_bind_4; Insect cuticle protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q7JZJ3 Q7JZJ3

Gene LinkOut

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