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Obp56g Odorant-binding protein 56g [ Drosophila melanogaster (fruit fly) ]

Gene ID: 37270, updated on 4-Jan-2025

Summary

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Official Symbol
Obp56gprovided by FlyBase
Official Full Name
Odorant-binding protein 56gprovided by FlyBase
Primary source
FLYBASE:FBgn0034474
Locus tag
Dmel_CG13873
See related
AllianceGenome:FB:FBgn0034474
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
56g; CG13873; DmelObp56g; Dmel\CG13873; OBP56g
Summary
Predicted to enable odorant binding activity. Involved in sexual reproduction. Located in extracellular space. Is expressed in adult head; embryonic antennal sense organ; embryonic maxillary sensory complex; labellar taste bristle; and labellum. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

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See Obp56g in Genome Data Viewer
Location:
56E3-56E3; 2-90 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (19783484..19784043, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (15670989..15671548, complement)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene Odorant receptor 56a Neighboring gene long non-coding RNA:CR45231 Neighboring gene transfer RNA:Lysine-CTT 1-11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Proteome profiling reveals tissue-specific protein expression in the male reproductive system of Drosophila melanogaster. Yamamoto MT, et al. Fly (Austin), 2010 Jan-Mar. PMID 20139713
  2. Aging and Autophagic Function Influences the Progressive Decline of Adult Drosophila Behaviors. Ratliff EP, et al. PLoS One, 2015. PMID 26182057, Free PMC Article
  3. Female influence on pre- and post-copulatory sexual selection and its genetic basis in Drosophila melanogaster. Giardina TJ, et al. Mol Ecol, 2011 Oct. PMID 21902747, Free PMC Article
  4. An odorant-binding protein required for suppression of sweet taste by bitter chemicals. Jeong YT, et al. Neuron, 2013 Aug 21. PMID 23972598, Free PMC Article
  5. Association of polymorphisms in odorant-binding protein genes with variation in olfactory response to benzaldehyde in Drosophila. Wang P, et al. Genetics, 2007 Nov. PMID 17720903, Free PMC Article

See all (47) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The seminal odorant binding protein Obp56g is required for mating plug formation and male fertility in Drosophila melanogaster.
    Title: The seminal odorant binding protein Obp56g is required for mating plug formation and male fertility in Drosophila melanogaster.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables odorant binding IEA
Inferred from Electronic Annotation
more info
  
enables odorant binding ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
involved_in sensory perception of chemical stimulus ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
involved_in sensory perception of smell IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in sexual reproduction HEP PubMed 
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
 PubMed 
located_in extracellular space HDA PubMed 

General protein information

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Preferred Names
Odorant-binding protein 56g
Names
CG13873-PA
CG13873-PB
Obp56g-PA
Obp56g-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    19783484..19784043 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_137603.3 → NP_611447.1  Odorant-binding protein 56g, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_611447.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A1ZBQ3, A9QI24, A9QI48, A9QI64
    Related
    FBpp0085644
    Conserved Domains (1) summary
    pfam01395
    Location:29 → 130
    PBP_GOBP; PBP/GOBP family

  2. NM_206181.3 → NP_995903.1  Odorant-binding protein 56g, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_995903.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A1ZBQ4, A9QI24, A9QI48, A9QI64
    Conserved Domains (1) summary
    pfam01395
    Location:30 → 131
    PBP_GOBP; PBP/GOBP family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A1ZBQ3 A1ZBQ3
A1ZBQ4 A1ZBQ4

Gene LinkOut

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