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Arl6 ADP ribosylation factor-like 6 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 37236, updated on 9-Dec-2024

Summary

Official Symbol
Arl6provided by FlyBase
Official Full Name
ADP ribosylation factor-like 6provided by FlyBase
Primary source
FLYBASE:FBgn0034446
Locus tag
Dmel_CG7735
See related
AllianceGenome:FB:FBgn0034446
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
A1ZBK9; ARL6; BBS3; CG7735; Dmel\CG7735
Summary
Predicted to enable GTP binding activity and GTPase activity. Involved in cilium assembly. Predicted to be located in cilium. Predicted to be active in axoneme. Is expressed in chordotonal neurons; eo neurons; and larval antenno-maxillary sensory complex. Human ortholog(s) of this gene implicated in Bardet-Biedl syndrome; Bardet-Biedl syndrome 1; Bardet-Biedl syndrome 3; and retinitis pigmentosa 55. Orthologous to human ARL6 (ADP ribosylation factor like GTPase 6). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See Arl6 in Genome Data Viewer
Location:
56D7-56D7; 2-89 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (19444179..19445058)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (15331684..15332563)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Spt5 Neighboring gene ncRNA Neighboring gene Ribosomal protein L11 Neighboring gene Elongin C Neighboring gene beta-Tubulin at 56D

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables GTP binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 
enables GTPase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in cilium assembly IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in cilium assembly IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in cilium assembly ISM
Inferred from Sequence Model
more info
PubMed 
involved_in intracellular protein transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in intracellular transport ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in protein localization to cilium IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in vesicle-mediated transport IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in axoneme IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in axoneme ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in cilium IC
Inferred by Curator
more info
PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
ADP ribosylation factor-like 6
Names
Arl6-PA
Arl6-PB
CG7735-PA
CG7735-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    19444179..19445058
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_137577.3NP_611421.1  ADP ribosylation factor-like 6, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_611421.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A1ZBK9, Q4V546
    Related
    FBpp0085718
    Conserved Domains (1) summary
    cd04157
    Location:19182
    Arl6; Arf-like 6 (Arl6) GTPase
  2. NM_001299686.1NP_001286615.1  ADP ribosylation factor-like 6, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001286615.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0B4LFW0, Q4V546
    Conserved Domains (1) summary
    cd04157
    Location:19181
    Arl6; Arf-like 6 (Arl6) GTPase