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CG4984 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 37017, updated on 9-Dec-2024

Summary

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Official Symbol
CG4984provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0034267
Locus tag
Dmel_CG4984
See related
AllianceGenome:FB:FBgn0034267
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG4984
Summary
Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in adult head; larval muscle system; and larval somatic muscle cell. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG4984 in Genome Data Viewer
Location:
54E2-54E4; 2-84 cM
Exon count:
9
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (17726914..17732987)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (13614419..13620492)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Dachs ligand with SH3s Neighboring gene Sorting nexin 16 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene hyccin Neighboring gene Phosphatidylinositol glycan anchor biosynthesis class A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Combinatorial binding leads to diverse regulatory responses: Lmd is a tissue-specific modulator of Mef2 activity. Cunha PM, et al. PLoS Genet, 2010 Jul 1. PMID 20617173, Free PMC Article
  2. GlycoFly: a database of Drosophila N-linked glycoproteins identified using SPEG--MS techniques. Baycin-Hizal D, et al. J Proteome Res, 2011 Jun 3. PMID 21480662
  3. Transient junction anisotropies orient annular cell polarization in the Drosophila airway tubes. Hosono C, et al. Nat Cell Biol, 2015 Dec. PMID 26551273
  4. Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes. López-Varea A, et al. G3 (Bethesda), 2021 Dec 8. PMID 34599810, Free PMC Article
  5. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article

See all (23) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG4984-PA
CG4984-PB
CG4984-PC
CG4984-PD

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    17726914..17732987
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001169712.2 → NP_001163183.1  uncharacterized protein Dmel_CG4984, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001163183.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    E1JGK3, Q8MRX2
    Conserved Domains (1) summary
    cl21598
    Location:38 → 93
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

  2. NM_001144223.3 → NP_001137695.1  uncharacterized protein Dmel_CG4984, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001137695.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A1ZAY4, Q8MRX2
    Conserved Domains (1) summary
    cl21598
    Location:38 → 93
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

  3. NM_001169711.2 → NP_001163182.1  uncharacterized protein Dmel_CG4984, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001163182.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    E1JGK3, Q8MRX2
    Conserved Domains (1) summary
    cl21598
    Location:38 → 93
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

  4. NM_137410.4 → NP_611254.2  uncharacterized protein Dmel_CG4984, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_611254.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A1ZAY4, Q8MRX2
    Related
    FBpp0086022
    Conserved Domains (1) summary
    cl21598
    Location:38 → 93
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A1ZAY4 A1ZAY4
E1JGK3 E1JGK3
Q8MRX2 Q8MRX2
Q8T0C9 Q8T0C9

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