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eIF3c eukaryotic translation initiation factor 3 subunit c [ Drosophila melanogaster (fruit fly) ]

Gene ID: 37005, updated on 9-Dec-2024

Summary

Official Symbol
eIF3cprovided by FlyBase
Official Full Name
eukaryotic translation initiation factor 3 subunit cprovided by FlyBase
Primary source
FLYBASE:FBgn0034258
Locus tag
Dmel_CG4954
See related
AllianceGenome:FB:FBgn0034258
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG4954; Dmel\CG4954; eIF-3c; eIF3; eIF3-s8; eIF3-S8
Summary
Predicted to enable translation initiation factor binding activity. Predicted to contribute to translation initiation factor activity. Predicted to be involved in translational initiation. Predicted to be located in cytosol. Predicted to be part of eukaryotic translation initiation factor 3 complex. Is expressed in several structures, including adult head; adult heart; ganglia; and spermatozoon. Orthologous to human EIF3C (eukaryotic translation initiation factor 3 subunit C) and EIF3CL (eukaryotic translation initiation factor 3 subunit C like). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See eIF3c in Genome Data Viewer
Location:
54D4-54D4; 2-83 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (17665678..17669275)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (13553183..13556780)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Oxpecker Neighboring gene CCHamide-1 receptor Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 
contributes_to translation initiation factor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
 
enables translation initiation factor activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
enables translation initiation factor binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables translation initiation factor binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in translational initiation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in translational initiation IEA
Inferred from Electronic Annotation
more info
 
involved_in translational initiation ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Component Evidence Code Pubs
located_in cytosol ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
part_of eukaryotic translation initiation factor 3 complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of eukaryotic translation initiation factor 3 complex IEA
Inferred from Electronic Annotation
more info
 
part_of eukaryotic translation initiation factor 3 complex ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 

General protein information

Preferred Names
eukaryotic translation initiation factor 3 subunit c
Names
CG4954-PA
CG4954-PB
eIF3-S8
eIF3c-PA
eIF3c-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    17665678..17669275
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001299616.1NP_001286545.1  eukaryotic translation initiation factor 3 subunit c, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001286545.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A1ZAX1, Q8MR49
    UniProtKB/TrEMBL
    A0A0B4LFL2
    Conserved Domains (2) summary
    smart00753
    Location:744823
    PAM; PCI/PINT associated module
    pfam05470
    Location:24671
    eIF-3c_N; Eukaryotic translation initiation factor 3 subunit 8 N-terminus
  2. NM_137398.2NP_611242.1  eukaryotic translation initiation factor 3 subunit c, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_611242.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A1ZAX1, Q8MR49
    UniProtKB/TrEMBL
    A0A0B4LFL2
    Related
    FBpp0086013
    Conserved Domains (2) summary
    smart00753
    Location:744823
    PAM; PCI/PINT associated module
    pfam05470
    Location:24671
    eIF-3c_N; Eukaryotic translation initiation factor 3 subunit 8 N-terminus