U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Rab4 Rab4 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 36992, updated on 9-Dec-2024

Summary

Official Symbol
Rab4provided by FlyBase
Official Full Name
Rab4provided by FlyBase
Primary source
FLYBASE:FBgn0016701
Locus tag
Dmel_CG4921
See related
AllianceGenome:FB:FBgn0016701
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG 4921; CG4921; Dmel\CG4921; DmRab4; DRAB4; Q7KY04; rab4; RAB4; RAB4c
Summary
Predicted to enable GTP binding activity and GTPase activity. Involved in follicle cell of egg chamber-cell adhesion. Located in neuronal cell body; recycling endosome; and synapse. Is expressed in several structures, including adult ensheathing glial cell; brain; imaginal disc; mushroom body; and synaptic neuropil domain. Orthologous to several human genes including RAB4B (RAB4B, member RAS oncogene family). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Rab4 in Genome Data Viewer
Location:
54C9-54C10; 2-83 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (17573462..17574979)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (13460967..13462484)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Plenty of SH3s Neighboring gene Ubiquinol-cytochrome c reductase 6.4 kDa subunit Neighboring gene uncharacterized protein Neighboring gene Dicer-2 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables GTP binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 
enables GTPase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 
enables GTPase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in Rab protein signal transduction IEA
Inferred from Electronic Annotation
more info
 
involved_in Rab protein signal transduction ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in follicle cell of egg chamber-cell adhesion IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of endocytosis IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in vesicle-mediated transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in vesicle-mediated transport ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
located_in endosome IDA
Inferred from Direct Assay
more info
PubMed 
located_in neuronal cell body IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane HDA PubMed 
is_active_in recycling endosome IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in recycling endosome IDA
Inferred from Direct Assay
more info
PubMed 
located_in synapse HDA PubMed 
located_in synapse IDA
Inferred from Direct Assay
more info
PubMed 
located_in vesicle ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
Rab4
Names
CG4921-PA
CG4921-PB
Rab-protein 4
Rab4-PA
Rab4-PB

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    17573462..17574979
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_166240.3NP_725696.1  Rab4, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_725696.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B5RJE3, Q7KY04
    Related
    FBpp0086009
    Conserved Domains (1) summary
    cd04113
    Location:9169
    Rab4; Rab GTPase family 4 (Rab4)
  2. NM_079053.4NP_523777.1  Rab4, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_523777.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B5RJE3, Q7KY04
    Related
    FBpp0086008
    Conserved Domains (1) summary
    cd04113
    Location:9169
    Rab4; Rab GTPase family 4 (Rab4)