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CG4712 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 36469, updated on 9-Dec-2024

Summary

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Official Symbol
CG4712provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0033818
Locus tag
Dmel_CG4712
See related
AllianceGenome:FB:FBgn0033818
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG4712
Summary
Predicted to be involved in cilium assembly. Predicted to be active in axoneme and ciliary basal body. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG4712 in Genome Data Viewer
Location:
49F13-49F13; 2-68 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (13248894..13251724, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (9136399..9139229, complement)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45278 Neighboring gene Muscle protein 20 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR44343

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Pri peptides are mediators of ecdysone for the temporal control of development. Chanut-Delalande H, et al. Nat Cell Biol, 2014 Nov. PMID 25344753
  2. Comparative transcriptional analysis uncovers molecular processes in early and mature somatic cyst cells of Drosophila testes. Adashev VE, et al. Eur J Cell Biol, 2022 Jun-Aug. PMID 35667338
  3. Genome-wide prediction of Polycomb/Trithorax response elements in Drosophila melanogaster. Ringrose L, et al. Dev Cell, 2003 Nov. PMID 14602076
  4. An expanded toolkit for Drosophila gene tagging using synthesized homology donor constructs for CRISPR-mediated homologous recombination. Kanca O, et al. Elife, 2022 Jun 20. PMID 35723254, Free PMC Article
  5. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article

See all (23) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in cilium assembly IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in axoneme IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in ciliary basal body IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG4712-PA
CG4712-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    13248894..13251724 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_165975.2 → NP_725272.2  uncharacterized protein Dmel_CG4712, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_725272.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A1Z9B1, Q6NQX6
    Related
    FBpp0086871
    Conserved Domains (1) summary
    pfam13870
    Location:460 → 635
    DUF4201; Domain of unknown function (DUF4201)

  2. NM_137012.2 → NP_610856.1  uncharacterized protein Dmel_CG4712, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_610856.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A1Z9B0, Q6NQX1
    Related
    FBpp0086870
    Conserved Domains (1) summary
    pfam13870
    Location:487 → 662
    DUF4201; Domain of unknown function (DUF4201)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A1Z9B0 A1Z9B0
A1Z9B1 A1Z9B1
Q6NQX1 Q6NQX1
Q6NQX6 Q6NQX6

Gene LinkOut

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