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CG13319 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 36423, updated on 9-Dec-2024

Summary

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Official Symbol
CG13319provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0033781
Locus tag
Dmel_CG13319
See related
AllianceGenome:FB:FBgn0033781
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BcDNA:GH19585; Dmel\CG13319
Summary
Predicted to be involved in proteasome assembly. Is expressed in adult head. Orthologous to human PSMG4 (proteasome assembly chaperone 4). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

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See CG13319 in Genome Data Viewer
Location:
49E1-49E1; 2-67 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (12923904..12924664)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (8811409..8812169)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44461 Neighboring gene NAT1 Neighboring gene sugarbabe Neighboring gene uncharacterized protein Neighboring gene Squamous cell carcinoma-related oncogene 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptomic analysis of inbreeding depression in cold-sensitive Drosophila melanogaster shows upregulation of the immune response. Vermeulen CJ, et al. J Evol Biol, 2013 Sep. PMID 23944235
  2. A protein complex network of Drosophila melanogaster. Guruharsha KG, et al. Cell, 2011 Oct 28. PMID 22036573, Free PMC Article
  3. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article
  4. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article
  5. A global in vivo Drosophila RNAi screen identifies NOT3 as a conserved regulator of heart function. Neely GG, et al. Cell, 2010 Apr 2. PMID 20371351, Free PMC Article

See all (23) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in proteasome assembly IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG13319-PA
CG13319-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    12923904..12924664
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_136981.3 → NP_610825.2  uncharacterized protein Dmel_CG13319, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_610825.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7JWR4
    Related
    FBpp0086901, FBtr0087788
    Conserved Domains (1) summary
    pfam16093
    Location:36 → 106
    PAC4; Proteasome assembly chaperone 4

  2. NM_001169660.1 → NP_001163131.1  uncharacterized protein Dmel_CG13319, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001163131.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7JWR4
    Conserved Domains (1) summary
    pfam16093
    Location:36 → 106
    PAC4; Proteasome assembly chaperone 4
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q7JWR4 Q7JWR4

Gene LinkOut

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