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Ptp4a1l1 protein tyrosine phosphatase 4A1 like 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 363438, updated on 4-Jan-2025

Summary

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Official Symbol
Ptp4a1l1provided by RGD
Official Full Name
protein tyrosine phosphatase 4A1 like 1provided by RGD
Primary source
RGD:1566035
See related
AllianceGenome:RGD:1566035
Gene type
pseudo
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1566035
Summary
Predicted to enable protein tyrosine phosphatase activity. Predicted to be located in cytoplasm; cytoskeleton; and nucleus. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See Ptp4a1l1 in Genome Data Viewer
Location:
Xq35
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) X NC_086039.1 (121655427..121720602)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) X NC_051356.1 (116789584..116790544)
106 previous assembly Rnor_6.0 (GCF_000001895.5) X NC_005120.4 (124147363..124148229)

Chromosome X - NC_086039.1Genomic Context describing neighboring genes Neighboring gene cardiolipin synthase 1, pseudogene 1 Neighboring gene GTPase NRas-like Neighboring gene BTG anti-proliferation factor 1C Neighboring gene BTG anti-proliferation factor 1B Neighboring gene myelin-associated neurite-outgrowth inhibitor-like Neighboring gene reproductive homeobox 10 Neighboring gene Rhox homeobox family member 11 Neighboring gene Rhox homeobox family member 12

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086039.1 Reference GRCr8

    Range
    121655427..121720602
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_010061338.1 RNA Sequence

Nucleotide Protein Strain
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Molecular Biology Databases
Research Materials