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Izumo4 IZUMO family member 4 [ Rattus norvegicus (Norway rat) ]

Gene ID: 362832, updated on 4-Jan-2025

Summary

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Official Symbol
Izumo4provided by RGD
Official Full Name
IZUMO family member 4provided by RGD
Primary source
RGD:1564722
See related
EnsemblRapid:ENSRNOG00000031950 AllianceGenome:RGD:1564722
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1564722
Summary
Orthologous to human IZUMO4 (IZUMO family member 4). [provided by Alliance of Genome Resources, Jan 2025]
Expression
Biased expression in Testes (RPKM 136.5), Thymus (RPKM 27.2) and 6 other tissues See more
Orthologs
human mouse all
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Genomic context

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See Izumo4 in Genome Data Viewer
Location:
7q11
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (9657975..9661699, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (9007276..9010428, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (11873884..11878624, complement)

Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134479808 Neighboring gene adaptor related protein complex 3 subunit delta 1 Neighboring gene uncharacterized LOC120093774 Neighboring gene MOB kinase activator 3A Neighboring gene SUMO-conjugating enzyme UBC9-B-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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Related articles in PubMed

  1. Proteomic characterization of the human sperm nucleus. de Mateo S, et al. Proteomics, 2011 Jul. PMID 21630459

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
izumo sperm-egg fusion protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086025.1 Reference GRCr8

    Range
    9657975..9661699 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063264492.1 → XP_063120562.1  izumo sperm-egg fusion protein 4 isoform X3

  2. XM_017595154.3 → XP_017450643.1  izumo sperm-egg fusion protein 4 isoform X4

    UniProtKB/TrEMBL
    A0A8I5ZSN1
    Related
    ENSRNOP00000040709.5, ENSRNOT00000049766.6
    Conserved Domains (1) summary
    pfam15005
    Location:27 → 166
    IZUMO; Izumo sperm-egg fusion, Ig domain-associated

  3. XM_063264489.1 → XP_063120559.1  izumo sperm-egg fusion protein 4 isoform X1

  4. XM_063264491.1 → XP_063120561.1  izumo sperm-egg fusion protein 4 isoform X3

  5. XM_063264490.1 → XP_063120560.1  izumo sperm-egg fusion protein 4 isoform X2

RNA

  1. XR_010053555.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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