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polyph polyphemus [ Drosophila melanogaster (fruit fly) ]

Gene ID: 36161, updated on 9-Dec-2024

Summary

Official Symbol
polyphprovided by FlyBase
Official Full Name
polyphemusprovided by FlyBase
Primary source
FLYBASE:FBgn0033572
Locus tag
Dmel_CG12943
See related
AllianceGenome:FB:FBgn0033572
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG12943; Dmel\CG12943
Summary
Predicted to enable L-amino acid transmembrane transporter activity. Involved in defense response to bacterium and phagocytosis. Located in extracellular space. Is expressed in adult abdomen; adult head; and adult thorax. Human ortholog(s) of this gene implicated in iminoglycinuria. Orthologous to several human genes including SLC36A1 (solute carrier family 36 member 1); SLC36A2 (solute carrier family 36 member 2); and SLC36A3 (solute carrier family 36 member 3). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See polyph in Genome Data Viewer
Location:
47C6-47C6; 2-63 cM
Exon count:
7
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (10903570..10905563)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (6791075..6793068)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene NADH dehydrogenase (ubiquinone) B14 subunit Neighboring gene RNA polymerase II, I and III subunit E Neighboring gene Odorant-binding protein 47a Neighboring gene Serpin 47C

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
polyphemus
Names
CG12943-PA
CG12943-PC
polyph-PA
polyph-PC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    10903570..10905563
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001299372.1NP_001286301.1  polyphemus, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001286301.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q4V5R4
    Conserved Domains (1) summary
    cl00456
    Location:5098
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
  2. NM_136787.2NP_610631.1  polyphemus, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_610631.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A0A0B4LG39, Q4V5R4
    Related
    FBpp0087294
    Conserved Domains (1) summary
    cl00456
    Location:50407
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain