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T05G5.1 Prothymosin alpha-like [ Caenorhabditis elegans ]

Gene ID: 3565362, updated on 2-Nov-2024

Summary

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Official Symbol
T05G5.1
Official Full Name
Prothymosin alpha-like
Primary source
WormBase:WBGene00011498
Locus tag
CELE_T05G5.1
See related
AllianceGenome:WB:WBGene00011498
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See T05G5.1 in Genome Data Viewer
Location:
chromosome: III
Exon count:
8
Sequence:
Chromosome: III; NC_003281.10 (9739094..9743339, complement)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Helix-loop-helix protein 4 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Translation elongation factor IF5A C-terminal domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. MDT-28/PLIN-1 mediates lipid droplet-microtubule interaction via DLC-1 in Caenorhabditis elegans. Xie K, et al. Sci Rep, 2019 Oct 17. PMID 31624276, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Prothymosin alpha-like
NP_001255018.1
  • Confirmed by transcript evidence
NP_001255019.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    9739094..9743339 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001268089.4 → NP_001255018.1  Prothymosin alpha-like [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001255018.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P34554
    Conserved Domains (1) summary
    pfam00008
    Location:35 → 65
    EGF; EGF-like domain

  2. NM_001268090.3 → NP_001255019.1  Prothymosin alpha-like [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001255019.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G1K0V7
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P34554.3

Gene LinkOut

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