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Tc00.1047053506529.330 hypothetical protein [ Trypanosoma cruzi ]

Gene ID: 3554973, updated on 23-Nov-2023

Summary

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Gene symbol
Tc00.1047053506529.330
Gene description
hypothetical protein
Locus tag
Tc00.1047053506529.330
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Trypanosoma cruzi (strain: CL Brener)
Lineage
Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina; Trypanosomatida; Trypanosomatidae; Trypanosoma; Schizotrypanum
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Genomic context

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See Tc00.1047053506529.330 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_001849535.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene protein kinase domain, putative Neighboring gene cytochrome C oxidase subunit IV, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001849535.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020725
  2. Comparative genomics of trypanosomatid parasitic protozoa. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020724
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

  • heterozygous, Esmeraldo-like haplotype
    allele of Tc00.1047053510889.20

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3-phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of BBSome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_821922.1
  • heterozygous, Esmeraldo-like haplotype
    allele of Tc00.1047053510889.20

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001849535.1 Reference assembly

    Range
    104449..105570 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_816829.1 → XP_821922.1  hypothetical protein, conserved [Trypanosoma cruzi]

    See identical proteins and their annotated locations for XP_821922.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2V2V5N8, Q4E5P7, Q86PG0, V5BJR9
    Conserved Domains (1) summary
    pfam07289
    Location:18 → 371
    BBL5; Bardet-Biedl syndrome 5 protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials