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CG17211 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 34639, updated on 9-Dec-2024

Summary

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Official Symbol
CG17211provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0032414
Locus tag
Dmel_CG17211
See related
AllianceGenome:FB:FBgn0032414
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG17211
Summary
Predicted to enable integrin binding activity. Predicted to be involved in epithelial tube morphogenesis. Predicted to be located in extracellular matrix. Predicted to be active in extracellular region. Is expressed in spermatozoon. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG17211 in Genome Data Viewer
Location:
33C4-33D2; 2-46 cM
Exon count:
6
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (12114360..12129896)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (12114360..12129896)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Phaedra 1 Neighboring gene Phaedra 2 Neighboring gene rhomboid-6 Neighboring gene Gustatory receptor 33a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Degeneration of Injured Axons and Dendrites Requires Restraint of a Protective JNK Signaling Pathway by the Transmembrane Protein Raw. Hao Y, et al. J Neurosci, 2019 Oct 23. PMID 31492772, Free PMC Article
  2. Defensive repertoire of Drosophila larvae in response to toxic fungi. Trienens M, et al. Mol Ecol, 2017 Oct. PMID 28746736
  3. Evidence for tissue-specific Jak/STAT target genes in Drosophila optic lobe development. Wang H, et al. Genetics, 2013 Dec. PMID 24077308, Free PMC Article
  4. Genome-wide analyses of Shavenbaby target genes reveals distinct features of enhancer organization. Menoret D, et al. Genome Biol, 2013 Aug 23. PMID 23972280, Free PMC Article
  5. Flying toward a plastic-free world: Can Drosophila serve as a model organism to develop new strategies of plastic waste management? Pignataro E, et al. Sci Total Environ, 2024 Mar 1. PMID 38199375

See all (25) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables integrin binding ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
involved_in epithelial tube morphogenesis ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
located_in extracellular matrix ISS
Inferred from Sequence or Structural Similarity
more info
  
is_active_in extracellular region IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG17211-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    12114360..12129896
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_135708.2 → NP_609552.1  uncharacterized protein Dmel_CG17211 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_609552.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F3YDL4, Q9VKA7
    Related
    FBpp0079918
    Conserved Domains (1) summary
    smart00214
    Location:237 → 294
    VWC; von Willebrand factor (vWF) type C domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VKA7 Q9VKA7

Gene LinkOut

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