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Boh2 Buddy of Hmr 2 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 34559, updated on 4-Jan-2025

Summary

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Official Symbol
Boh2provided by FlyBase
Official Full Name
Buddy of Hmr 2provided by FlyBase
Primary source
FLYBASE:FBgn0032354
Locus tag
Dmel_CG4788
See related
AllianceGenome:FB:FBgn0032354
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG4788; Dmel\CG4788
Summary
Located in pericentric heterochromatin. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See Boh2 in Genome Data Viewer
Location:
32E1-32E1; 2-44 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (11179032..11180430)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (11179032..11180430)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Ca2+-channel-protein-beta-subunit Neighboring gene Vitelline membrane 32E Neighboring gene long non-coding RNA:CR43859 Neighboring gene abrupt Neighboring gene CENP-meta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Integrity of the HMR complex is necessary for centromeric binding and reproductive isolation in Drosophila. Lukacs A, et al. PLoS Genet, 2021 Aug. PMID 34424906, Free PMC Article
  2. [Identification of C(2)M interacting proteins by yeast two-hybrid screening]. Yue SS, et al. Yi Chuan, 2015 Nov. PMID 26582530
  3. The RNA-binding protein Arrest (Bruno) regulates alternative splicing to enable myofibril maturation in Drosophila flight muscle. Spletter ML, et al. EMBO Rep, 2015 Feb. PMID 25532219, Free PMC Article
  4. A pair of centromeric proteins mediates reproductive isolation in Drosophila species. Thomae AW, et al. Dev Cell, 2013 Nov 25. PMID 24239514
  5. Genome-wide analysis of Staufen-associated mRNAs identifies secondary structures that confer target specificity. Laver JD, et al. Nucleic Acids Res, 2013 Nov. PMID 23945942, Free PMC Article

See all (25) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Component Evidence Code Pubs
located_in pericentric heterochromatin IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
buddy of Hmr 2
Names
Boh2-PA
Boh2-PB
CG4788-PA
CG4788-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    11179032..11180430
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_135655.4 → NP_609499.1  buddy of Hmr 2, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_609499.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8MZ05, Q9VKI2
    Related
    FBpp0079791
    Conserved Domains (1) summary
    cl11423
    Location:49 → 119
    VirB9_CagX_TrbG; VirB9/CagX/TrbG, a component of the type IV secretion system

  2. NM_001298909.1 → NP_001285838.1  buddy of Hmr 2, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001285838.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8MZ05, Q9VKI2
    Conserved Domains (1) summary
    cl11423
    Location:49 → 119
    VirB9_CagX_TrbG; VirB9/CagX/TrbG, a component of the type IV secretion system
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8MZ05 Q8MZ05
Q9VKI2 Q9VKI2

Gene LinkOut

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