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CG12299 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 34483, updated on 9-Dec-2024

Summary

Official Symbol
CG12299provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0032295
Locus tag
Dmel_CG12299
See related
AllianceGenome:FB:FBgn0032295
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG12299
Summary
Predicted to enable DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in central brain primordium; embryonic brain; larval ventral nerve cord; organism; and ventral nerve cord primordium. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See CG12299 in Genome Data Viewer
Location:
32A5-32A5; 2-43 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (10737345..10740762)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (10737345..10740762)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Dpy-30-like 1 Neighboring gene Nucleoporin 107kD Neighboring gene Vacuolar H[+] ATPase 16kD subunit 5 Neighboring gene uncharacterized protein Neighboring gene mir-4970 stem loop Neighboring gene uncharacterized protein Neighboring gene mir-9378 stem loop

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
uncharacterized protein
Names
CG12299-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    10737345..10740762
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_135604.3NP_609448.1  uncharacterized protein Dmel_CG12299 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_609448.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q960L6, Q9VKQ7
    Related
    FBpp0079702
    Conserved Domains (4) summary
    COG5048
    Location:254413
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:397417
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12756
    Location:312387
    zf-C2H2_2; C2H2 type zinc-finger (2 copies)
    pfam13465
    Location:437462
    zf-H2C2_2; Zinc-finger double domain