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CG13126 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 34323, updated on 9-Dec-2024

Summary

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Official Symbol
CG13126provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0032168
Locus tag
Dmel_CG13126
See related
AllianceGenome:FB:FBgn0032168
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
anon-WO0118547.208; Dmel\CG13126; METTL17
Summary
Predicted to enable methyltransferase activity. Predicted to be involved in translation. Is expressed in several structures, including anterior endoderm; dorsal pharyngeal muscle primordium; embryonic/larval midgut; embryonic/larval midgut primordium; and larval muscle cell. Orthologous to human METTL17 (methyltransferase like 17). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG13126 in Genome Data Viewer
Location:
30F2-30F2; 2-38 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (9952072..9954181, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (9952072..9954181, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR45949 Neighboring gene mir-87 stem loop Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR44872 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A cytological F1 RNAi screen for defects in Drosophila melanogaster female meiosis. Gilliland WD, et al. Genetics, 2024 May 7. PMID 38531678,
  2. The 18S ribosomal RNA m(6) A methyltransferase Mettl5 is required for normal walking behavior in Drosophila. Leismann J, et al. EMBO Rep, 2020 Jul 3. PMID 32350990, Free PMC Article
  3. Age-specific variation in immune response in Drosophila melanogaster has a genetic basis. Felix TM, et al. Genetics, 2012 Jul. PMID 22554890, Free PMC Article
  4. Automated identification of putative methyltransferases from genomic open reading frames. Katz JE, et al. Mol Cell Proteomics, 2003 Aug. PMID 12872006
  5. A large-scale RNAi screen reveals that mitochondrial function is important for meiotic chromosome organization in oocytes. Nieken KJ, et al. Chromosoma, 2023 Mar. PMID 36648541, Free PMC Article

See all (27) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding ISS
Inferred from Sequence or Structural Similarity
more info
  
enables methyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of ribosome ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
involved_in mitochondrial small ribosomal subunit assembly ISS
Inferred from Sequence or Structural Similarity
more info
  
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of mitochondrial small ribosomal subunit ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG13126-PA
CG13126-PB
NP_001285787.1
NP_609330.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    9952072..9954181 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001298858.1 → NP_001285787.1  uncharacterized protein Dmel_CG13126, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001285787.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VL60
    Conserved Domains (1) summary
    pfam09243
    Location:156 → 441
    Rsm22; Mitochondrial small ribosomal subunit Rsm22

  2. NM_135486.5 → NP_609330.1  uncharacterized protein Dmel_CG13126, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_609330.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VL60
    Related
    FBpp0079488
    Conserved Domains (1) summary
    pfam09243
    Location:156 → 441
    Rsm22; Mitochondrial small ribosomal subunit Rsm22
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VL60 Q9VL60

Gene LinkOut

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