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CG12560 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 34092, updated on 9-Dec-2024

Summary

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Official Symbol
CG12560provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0031974
Locus tag
Dmel_CG12560
See related
AllianceGenome:FB:FBgn0031974
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG12560
Summary
Predicted to enable glycine N-acyltransferase activity. Orthologous to several human genes including GLYATL3 (glycine-N-acyltransferase like 3). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG12560 in Genome Data Viewer
Location:
28D3-28D3; 2-29 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (8008302..8009477, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (8008302..8009477, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Starvation-upregulated protein Neighboring gene WW domain containing oxidoreductase Neighboring gene Serpin 28Dc Neighboring gene Glycine N-acyltransferase Neighboring gene Transglutaminase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Nonlinear expression patterns and multiple shifts in gene network interactions underlie robust phenotypic change in Drosophila melanogaster selected for night sleep duration. Souto-Maior C, et al. PLoS Comput Biol, 2023 Aug. PMID 37561813, Free PMC Article
  2. Drosophila Serpin-28D regulates hemolymph phenoloxidase activity and adult pigmentation. Scherfer C, et al. Dev Biol, 2008 Nov 15. PMID 18801354
  3. Global and specific responses of the histone acetylome to systematic perturbation. Feller C, et al. Mol Cell, 2015 Feb 5. PMID 25578876
  4. The Trithorax group protein dMLL3/4 instructs the assembly of the zygotic genome at fertilization. Prudêncio P, et al. EMBO Rep, 2018 Aug. PMID 30037897, Free PMC Article
  5. Following the 'tracks': Tramtrack69 regulates epithelial tube expansion in the Drosophila ovary through Paxillin, Dynamin, and the homeobox protein Mirror. Peters NC, et al. Dev Biol, 2013 Jun 15. PMID 23545328, Free PMC Article

See all (28) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables acyltransferase activity, transferring groups other than amino-acyl groups IEA
Inferred from Electronic Annotation
more info
  
enables glycine N-acyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG12560-PB
CG12560-PC
NP_001285736.1
NP_609173.2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    8008302..8009477 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001298807.1 → NP_001285736.1  uncharacterized protein Dmel_CG12560, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001285736.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    X2JDI9
    Conserved Domains (1) summary
    pfam08445
    Location:187 → 271
    FR47; FR47-like protein

  2. NM_135329.2 → NP_609173.2  uncharacterized protein Dmel_CG12560, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_609173.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A2RVD6, Q9VLU3
    Conserved Domains (1) summary
    pfam08445
    Location:193 → 277
    FR47; FR47-like protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VLU3 Q9VLU3
X2JDI9 X2JDI9

Gene LinkOut

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