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CG6055 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 34027, updated on 17-Dec-2024

Summary

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Official Symbol
CG6055provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0031918
Locus tag
Dmel_CG6055
See related
AllianceGenome:FB:FBgn0031918
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG6055
Summary
Predicted to enable carbohydrate binding activity. Is expressed in several structures, including adult head; dorsal sensory complex proper primordium; epithelium; gland; and gut section. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

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See CG6055 in Genome Data Viewer
Location:
28A1-28A1; 2-27 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (7466543..7472493)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (7466543..7472493)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Gustatory receptor 28a Neighboring gene Gustatory receptor 28b Neighboring gene Zizimin Neighboring gene uncharacterized protein Neighboring gene Odorant-binding protein 28a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The putative C-type lectin Schlaff ensures epidermal barrier compactness in Drosophila. Zuber R, et al. Sci Rep, 2019 Mar 29. PMID 30926832, Free PMC Article
  2. Regional specialization, polyploidy, and seminal fluid transcripts in the Drosophila female reproductive tract. Thayer RC, et al. Proc Natl Acad Sci U S A, 2024 Oct 29. PMID 39453739,
  3. Lectin-like proteins in model organisms: implications for evolution of carbohydrate-binding activity. Dodd RB, et al. Glycobiology, 2001 May. PMID 11425795
  4. Comparative genomic analysis of C-type lectin-domain genes in seven holometabolous insect species. Lu Y, et al. Insect Biochem Mol Biol, 2020 Nov. PMID 32841718
  5. Participation of a galactose-specific C-type lectin in Drosophila immunity. Tanji T, et al. Biochem J, 2006 May 15. PMID 16475980, Free PMC Article

See all (30) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables carbohydrate binding ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
Names
CG6055-PA
CG6055-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    7466543..7472493
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_135278.4 → NP_609122.1  uncharacterized protein Dmel_CG6055, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_609122.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VM07
    Related
    FBpp0079077
    Conserved Domains (1) summary
    cd00037
    Location:50 → 201
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

  2. NM_001273270.1 → NP_001260199.1  uncharacterized protein Dmel_CG6055, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001260199.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VM07
    Conserved Domains (1) summary
    cd00037
    Location:50 → 201
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VM07 Q9VM07

Gene LinkOut

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