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CG9536 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 33904, updated on 9-Dec-2024

Summary

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Official Symbol
CG9536provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0031818
Locus tag
Dmel_CG9536
See related
AllianceGenome:FB:FBgn0031818
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG9536
Summary
Predicted to be involved in protein glycosylation and retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum. Predicted to be located in membrane. Predicted to be active in Golgi apparatus. Is expressed in adult head and organism. Orthologous to human TMEM115 (transmembrane protein 115). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

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See CG9536 in Genome Data Viewer
Location:
26D7-26D7; 2-20 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (6474438..6476975, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (6474438..6476975, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene HemK methyltransferase 1 Neighboring gene mummy Neighboring gene Sec61 alpha subunit Neighboring gene long non-coding RNA:CR45463 Neighboring gene Daxx-like protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sec61alpha is required for dorsal closure during Drosophila embryogenesis through its regulation of Dpp signaling. Wang X, et al. Dev Dyn, 2010 Mar. PMID 20112345, Free PMC Article
  2. Drosophila Trf4-1 involves in mRNA and primary miRNA transcription. Liu Y, et al. Biochem Biophys Res Commun, 2019 Apr 16. PMID 30837153
  3. The nonspecific lethal complex is a transcriptional regulator in Drosophila. Raja SJ, et al. Mol Cell, 2010 Jun 25. PMID 20620954
  4. Analysis of the eye developmental pathway in Drosophila using DNA microarrays. Michaut L, et al. Proc Natl Acad Sci U S A, 2003 Apr 1. PMID 12655063, Free PMC Article
  5. A transcriptome-wide RNAi screen in the Drosophila ovary reveals factors of the germline piRNA pathway. Czech B, et al. Mol Cell, 2013 Jun 6. PMID 23665227, Free PMC Article

See all (29) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in protein glycosylation ISS
Inferred from Sequence or Structural Similarity
more info
  
involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in Golgi apparatus IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in Golgi apparatus ISS
Inferred from Sequence or Structural Similarity
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG9536-PA
CG9536-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    6474438..6476975 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001201777.2 → NP_001188706.1  uncharacterized protein Dmel_CG9536, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001188706.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VMD2
    Conserved Domains (1) summary
    pfam08551
    Location:54 → 157
    DUF1751; Eukaryotic integral membrane protein (DUF1751)

  2. NM_135189.4 → NP_609033.1  uncharacterized protein Dmel_CG9536, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_609033.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VMD2
    Related
    FBpp0078897
    Conserved Domains (1) summary
    pfam08551
    Location:54 → 157
    DUF1751; Eukaryotic integral membrane protein (DUF1751)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VMD2 Q9VMD2

Gene LinkOut

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