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si:ch211-51e12.7 si:ch211-51e12.7 [ Danio rerio (zebrafish) ]

Gene ID: 336335, updated on 12-Sep-2024

Summary

Official Symbol
si:ch211-51e12.7provided by ZNC
Official Full Name
si:ch211-51e12.7provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-8279
See related
Ensembl:ENSDARG00000045914 AllianceGenome:ZFIN:ZDB-GENE-030131-8279
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fj64c03; wu:fj64c03; zgc:153016; si:ch211-222h17.2
Orthologs
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Genomic context

See si:ch211-51e12.7 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 4 NC_007115.7 (308657..323471)
105 previous assembly GRCz10 (GCF_000002035.5) 4 NC_007115.6 (295178..310023)

Chromosome 4 - NC_007115.7Genomic Context describing neighboring genes Neighboring gene si:ch73-252i11.1 Neighboring gene GEN1 Holliday junction 5' flap endonuclease Neighboring gene mesogenin 1 Neighboring gene mitochondrial ribosomal protein S10 Neighboring gene TUB like protein 4a

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Clone Names

  • MGC153016

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein LOC336335

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001044754.2NP_001038219.1  uncharacterized protein LOC336335

    See identical proteins and their annotated locations for NP_001038219.1

    Status: PREDICTED

    Source sequence(s)
    BC142770
    UniProtKB/TrEMBL
    Q5TYZ7
    Related
    ENSDARP00000067488.6, ENSDART00000067489.7

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007115.7 Reference GRCz11 Primary Assembly

    Range
    308657..323471
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_660546.3 RNA Sequence