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CG3702 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 33628, updated on 9-Dec-2024

Summary

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Official Symbol
CG3702provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0031590
Locus tag
Dmel_CG3702
See related
AllianceGenome:FB:FBgn0031590
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
cg3702; Dmel\CG3702
Summary
Located in endomembrane system. Is expressed in adult head and organism. Orthologous to human CLPTM1 (CLPTM1 regulator of GABA type A receptor forward trafficking). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG3702 in Genome Data Viewer
Location:
24D8-24E1; 2-12 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (4224650..4227097, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (4224650..4227097, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Nicotinate phosphoribosyltransferase Neighboring gene fat Neighboring gene long non-coding RNA:CR44608 Neighboring gene Ribosomal protein L40

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Long-range spreading of dosage compensation in Drosophila captures transcribed autosomal genes inserted on X. Gorchakov AA, et al. Genes Dev, 2009 Oct 1. PMID 19797766, Free PMC Article
  2. Unwrapping glial biology: Gcm target genes regulating glial development, diversification, and function. Freeman MR, et al. Neuron, 2003 May 22. PMID 12765609
  3. Modifiers of notch transcriptional activity identified by genome-wide RNAi. Mourikis P, et al. BMC Dev Biol, 2010 Oct 19. PMID 20959007, Free PMC Article
  4. Mapping organelle proteins and protein complexes in Drosophila melanogaster. Tan DJ, et al. J Proteome Res, 2009 Jun. PMID 19317464
  5. GlycoFly: a database of Drosophila N-linked glycoproteins identified using SPEG--MS techniques. Baycin-Hizal D, et al. J Proteome Res, 2011 Jun 3. PMID 21480662

See all (28) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Component Evidence Code Pubs
located_in endomembrane system HDA PubMed 
is_active_in endomembrane system IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG3702-PA
CG3702-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    4224650..4227097 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_134975.2 → NP_608819.1  uncharacterized protein Dmel_CG3702, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_608819.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q960I8, Q9VQX6
    Related
    FBpp0077166, FBtr0077477
    Conserved Domains (1) summary
    pfam05602
    Location:55 → 496
    CLPTM1; Cleft lip and palate transmembrane protein 1 (CLPTM1)

  2. NM_001273088.1 → NP_001260017.1  uncharacterized protein Dmel_CG3702, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001260017.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q960I8, Q9VQX6
    Conserved Domains (1) summary
    pfam05602
    Location:55 → 496
    CLPTM1; Cleft lip and palate transmembrane protein 1 (CLPTM1)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VQX6 Q9VQX6

Gene LinkOut

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