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crp79 poly(A)-binding protein Crp79 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 3361521, updated on 18-Sep-2024

Summary

Official Symbol
crp79
Official Full Name
poly(A)-binding protein Crp79
Primary source
PomBase:SPAC1610.03c
Locus tag
SPOM_SPAC1610.03C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
meu5
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Genomic context

See crp79 in Genome Data Viewer
Location:
chromosome: I
Exon count:
4
Sequence:
Chromosome: I; NC_003424.3 (1792433..1794972, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene protein saf5 Neighboring gene ncRNA Neighboring gene mitochondrial 54S ribosomal protein uL1m Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene protein Mmc1

Interactions

General gene information

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables RNA binding PubMed 
enables mRNA 3'-UTR binding  
enables poly(A) binding  
enables poly(A) binding PubMed 
enables poly(U) RNA binding  
Component Evidence Code Pubs
is_active_in cytoplasm PubMed 
is_active_in cytoplasm PubMed 
is_active_in cytoplasmic stress granule  
is_active_in cytosol  
is_active_in nucleus  
is_active_in nucleus PubMed 
part_of ribonucleoprotein complex  

General protein information

Preferred Names
poly(A)-binding protein Crp79

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    1792433..1794972 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018920.3NP_001018242.1  poly(A)-binding protein Crp79 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_001018242.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q8X1D3, Q96WR4, Q9P6M8
    Conserved Domains (4) summary
    COG0724
    Location:109289
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd00590
    Location:205276
    RRM_SF; RNA recognition motif (RRM) superfamily
    cd12355
    Location:18106
    RRM_RBM18; RNA recognition motif in eukaryotic RNA-binding protein 18 and similar proteins
    cd12379
    Location:380459
    RRM2_I_PABPs; RNA recognition motif 2 found in type I polyadenylate-binding proteins
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